| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2957 |
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| Symbol | |
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| ID | 3566147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3194397 |
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| End bp | 3195566 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637681426 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_286157 |
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| Protein GI | 71908570 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.0178504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.933874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAA TCAACAAGCC GCTCATTGCC TTCGTTGTTG CCGCCATACT CGGCGGAGGA
TACTGGCTAT GGACCGGCCA CAAGGCCACT CCCGCCACTC AAAACAAGGC GGCGGGACCG
GTGCCAGTCA CCGTTGCCAA GGCGCAAAGC GGCGAGATGC CGGTTTACCT GAATGTTGTC
GGACGCGCCG AAGCCTACGA GGGCGTCACC GTCAAATCAC GCCTGGATGG CCAGATCCTG
GCTGTGGCCT ACACGGAAGG GCAGGCAGTC AAACAAGGCG ATGTTCTGGT CAGGCTCGAT
CCGGGCGATT TCAACGCCAA GGTCGCGCAG GCCGAAGCCA TCGTCGCCAA GGATCAGGCA
CAACTGGCCA AGGCGCAGGC CGACGTCGAA CGCTACTCTG GACTCAAGGC ACGCGGCTTT
GTGTCCGACG AGAAGGTCAA TGAAGTCCGA ACCAACGAAG CCGCTGCGGC AGCAACACTG
AAGGCAGATC AGGCCGGACT CGAACTGGCC CGCCTGCAAC TCTCCTACAC CACGGTCCGC
GCCCCCTTCG CTGGCGTCGT CGGCGCCCGG CTGGTCTTCC CTGGCTCTTC GGTCAAGATC
AATGACACGG CATTGGCCGT CGTCAACCGG ATCAACCCGC TCTACGTCAC TTTTGCCATC
CCGGAACGCC ACCTGCAACG ACTGCGGAAT GCCATGAGCA AGGGCGCGAT GAGCGTTCAG
ATCGCCTTGC CGGGAAGCAA GGATGCGCCG TTCGAAGGCA CGGCAAAATT CATCGACAAC
GCCGTGGATA TGACCACCGG CACAATCCAG ATGAAGGCGC TGCTCGACAA CAAGCAGGCC
CGACTGACGC CGGGACAGTT CCTCAATGTC AGCATGGTGC TCGACAAGCT GGCCGAGGCG
GTCCTCGTGC CCAACGAAGC GATACAACAG GGGGCCGATG GCAATTTCCT CTACGCGGTA
AAGCCCGACG ACACGGTTGA AGTCAGAAAG ATCGAGATCA TCGCCAGCTA TCAGGGCAAT
TCCGCCATTG CCAAGGGAGT CGCCGTCGGC GAAACGGTGG TCACCGATGG CCAGCTCCGG
CTGACACCAG GCGCCAGTGT CAGCAGCAAG CCGGTCAATC CCGAGGCAGC CAAGTCGAAG
GCACCCGAAC CAAGCCCTCC GGCACGCTGA
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| Protein sequence | MQKINKPLIA FVVAAILGGG YWLWTGHKAT PATQNKAAGP VPVTVAKAQS GEMPVYLNVV
GRAEAYEGVT VKSRLDGQIL AVAYTEGQAV KQGDVLVRLD PGDFNAKVAQ AEAIVAKDQA
QLAKAQADVE RYSGLKARGF VSDEKVNEVR TNEAAAAATL KADQAGLELA RLQLSYTTVR
APFAGVVGAR LVFPGSSVKI NDTALAVVNR INPLYVTFAI PERHLQRLRN AMSKGAMSVQ
IALPGSKDAP FEGTAKFIDN AVDMTTGTIQ MKALLDNKQA RLTPGQFLNV SMVLDKLAEA
VLVPNEAIQQ GADGNFLYAV KPDDTVEVRK IEIIASYQGN SAIAKGVAVG ETVVTDGQLR
LTPGASVSSK PVNPEAAKSK APEPSPPAR
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