Gene Daro_2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2931 
Symbol 
ID3566199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3157400 
End bp3157789 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content58% 
IMG OID637681400 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_286131 
Protein GI71908544 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.000640912 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCG ACGAACAGTT CAAACAAGGC TTGCAGATGC GCCAACAAGT GATGGGCGAG 
GCTTTCGTCG ACAAGGCCTT CGCCAATGTC GATGCCTTTA CCGCGCCGTT GCAGGAGTTC
GTGACCCGCA ACGCCTGGGG AACGACCTGG TGTCGTGAAG GACTCGACCT GAAAACCCGT
AGCCTGCTCA CCCTCTCGAT GCTCACTGCC CTCGGTCGTG CTACCGAAAT CAAGGGCCAC
GTGCGCGGGG CCATCAACAA TGGGGCGACG ATGCGGGAAA TTCAGGAAAC CCTGCTCCAC
GCTGCCGTTT ACTGCGGTTT TCCACTGGCT ATCGATGCCT TTCGTTCAGC GCAGGAGGTG
CTGAAGGAGA TGGGGGTCAT TGAGGGGTGA
 
Protein sequence
MNRDEQFKQG LQMRQQVMGE AFVDKAFANV DAFTAPLQEF VTRNAWGTTW CREGLDLKTR 
SLLTLSMLTA LGRATEIKGH VRGAINNGAT MREIQETLLH AAVYCGFPLA IDAFRSAQEV
LKEMGVIEG