Gene Daro_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2908 
Symbol 
ID3566255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3131597 
End bp3132865 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content59% 
IMG OID637681377 
Productperiplasmic copper-binding 
Protein accessionYP_286108 
Protein GI71908521 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3420] Nitrous oxidase accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.109404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.407024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTCG AGGCAGCAAT CCTGCCTTGG TGGCTTAATC TCGACCCAAT GAACTTTCGT 
TTCATCCTCG CCTTGCTCGG CCTGAGCCTT TCGCCCCCGG CCTTCGCCAA CCAATCCCTG
CAAGCCTGGC TCGACACCGC GCTACCGGGC ACGGTTCTGC GCCTGCCCCC CGGCAATTAC
AGCGGCCCGG CGACGATCAA CAAACCGTTG ACTGTGGAAG GCAACGGCAA GGTCATCATC
GACGCCGGCG GCAAGGGGAC CGTGCTGACC ATCAAGGCAG ACCGGGTAAC GGTGCGTGGC
CTGACCCTGC GCAGCAGCGG CGATTCTCAC GACGCGATCG ACGGCGGCAT CATGGTCGAG
GCAGGCAACG GGCTGCTGAT CGAAAACAAC GTCATCGAGG ACGTGCTGTT CGGCATTTCG
TTGCACCGGA CGACCGACAG CATCGTGCGC AACAACCGTA TCCGTAGTCG AGCGATCGAT
TCAGCCGAGC GCGGCGATGG TCTGCGCCTC TGGTACAGCA CCGGAAACCG TATAGAAAAC
AACGATATCG CGCAGATTCG CGACGTCACT ATCAGCAATT CACCGCACAA TCGCTATACC
GGCAACACCA TCCGAAACAG CCGCCGCGCG TTCAATCTGC TTTTTTCGCA TCGCAGCCTG
ATCGAGCGCA ACCTGCTGGA AAAGAATTCG ACCGGGATCA TTGCGCTTAA CTCGGATGGC
CTGCTCATTC GAAAAAATCG CATCCTGCAT GCCATGGATG CCTCCGGCGC CGGCATCGCA
CTGAAGGAAA CGTCGGCTGC ATTGATTGTG GACAACGAAA TCGTCCACTG CGCTCACGGC
ATCATGGCCG ATTCGCCAAT GGACGCGATC AACCGGATCG TCTTCATCAA CAATGTGATC
GCCCACAACA TTACCGGCAT CTACTTCTAC GGCGCCAAGG GCGGCCACAT CGCGATCAAC
AACACCTTCA AGAGCAACCT GTGGCCGGTG ACGATCATTG GCGATGGCGA CCCGATGAAC
GACACGTGGT GGGGCAACAA CTGGGATACC TATGAAGGCT TTGACCTCGA TGGCGACGGC
TTTGGCGACA AGCCACACGA ACTACACGCC TACGCCGACC GCATCTGGAT AGAAACGCCC
AGCGCCACCT TCTTTCGCAA CTCGCCGGTT CTGGAACTGC TCGATTTTCT TGAACGCCTG
GCCCCCTTCT CGACACCATC GCTGATTCTG CGCGACACGG CGCCACGCAT GAGGAAAGTG
CAGCAGTAA
 
Protein sequence
MQVEAAILPW WLNLDPMNFR FILALLGLSL SPPAFANQSL QAWLDTALPG TVLRLPPGNY 
SGPATINKPL TVEGNGKVII DAGGKGTVLT IKADRVTVRG LTLRSSGDSH DAIDGGIMVE
AGNGLLIENN VIEDVLFGIS LHRTTDSIVR NNRIRSRAID SAERGDGLRL WYSTGNRIEN
NDIAQIRDVT ISNSPHNRYT GNTIRNSRRA FNLLFSHRSL IERNLLEKNS TGIIALNSDG
LLIRKNRILH AMDASGAGIA LKETSAALIV DNEIVHCAHG IMADSPMDAI NRIVFINNVI
AHNITGIYFY GAKGGHIAIN NTFKSNLWPV TIIGDGDPMN DTWWGNNWDT YEGFDLDGDG
FGDKPHELHA YADRIWIETP SATFFRNSPV LELLDFLERL APFSTPSLIL RDTAPRMRKV
QQ