| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2892 |
|---|
| Symbol | |
|---|
| ID | 3566297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3117727 |
|---|
| End bp | 3118860 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637681361 |
|---|
| Product | rhodanese-like protein |
|---|
| Protein accession | YP_286092 |
|---|
| Protein GI | 71908505 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase
[COG2897] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 70 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.351885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC GTCTAAATCT GATGTGTTTG GGCCTGATTG CCGTGCTGGT GGCTGTGCCC
GGCGAAATCA TCTTTGGCGC GGCCTGTGCT GCGGAAGCCC CTGCACTCGA CGTCAAGGAT
GGCTGGTTCG AGTCGGTCGT TGATATTGAC TTCGTTGCCC AATATGCCGT TCTGCCCAAG
CCGGATGGTG TCCAGATCAT TGATGCCCGT GCGACGGAGC GCCGGTTCGA CCCGGGTCAT
ATCCCGACCG CAATGAATTT GCCGGAAAGA GATTTCGATA GGCTCGCCAA TCAGTTGCCC
AGTGACAAAG GGACGTTGCT GATCTTTTAT TGCGACGGCT TTGACTGCAT GCTTAGTCAC
AACGCTGCCT TCAAGGCCGA AGCCAGGGGG TACACCAACG TCAAGGTCTA TGCCGCCGGC
TATCCGGGTT GGATCAAGAG TGGCCACATT GGCGCCGTAT CGATCTCGTT CCTGAAGAAA
ACGCTCGATG AAGGTGCGCC GCTGACGCTG ATCGATTCGC GCCCGAAAGA GCACAAATAC
GACAAGGGTC ATATTCCCGG CGCCATCAGC CTGCCGGATT CCGATTTCGA GAAAATGCTC
GACCGCCTGC CGAGCGACAA GAACAGCCCT TTGTACTTTT ATTGCGACGG TTTTAGCTGC
AAGCTGAGTT CCGATTCGGC TGAGAAGGCT GTCAAGCTGG GTTACAAGCA GGTCAAGGTG
GTGCCTGAGG GCTATCCTGG TTGGGTCAAG CGCTATGGTC CGGGGTCGAT GCTGGCTGCG
GCTGCAAAGC CTGCAATCCA GACCACGGCC GACAAGGATG CAATCAGCAT CGCTTCGTTC
GAGAGGATTC TCAAGGAAGC TCCTGATTCC GTCTTTCTGG TGGACGTACG TGAGCCGGCA
GAGTTTGCCA GGGGTAGTTT CAAGGGGGCG GTGAATATCC CGGTCGCCAC TGTTGAAAAA
CGGGTGAGCG AACTGCCGAC TGACAAGCCG GTCATCTTCT TCTGCTCGGC CGGTGGGCGC
AGCGGTGACG CGTTGGACAG GGCACGCCTG GCGAAACCAA GTATTACCGC GTATTTTCTG
GATGCTAATG TCAAGTGGAT GCCGGATGGC GCTTACGCAA TCACCCCAAA CTGA
|
|---|
| Protein sequence | MKLRLNLMCL GLIAVLVAVP GEIIFGAACA AEAPALDVKD GWFESVVDID FVAQYAVLPK
PDGVQIIDAR ATERRFDPGH IPTAMNLPER DFDRLANQLP SDKGTLLIFY CDGFDCMLSH
NAAFKAEARG YTNVKVYAAG YPGWIKSGHI GAVSISFLKK TLDEGAPLTL IDSRPKEHKY
DKGHIPGAIS LPDSDFEKML DRLPSDKNSP LYFYCDGFSC KLSSDSAEKA VKLGYKQVKV
VPEGYPGWVK RYGPGSMLAA AAKPAIQTTA DKDAISIASF ERILKEAPDS VFLVDVREPA
EFARGSFKGA VNIPVATVEK RVSELPTDKP VIFFCSAGGR SGDALDRARL AKPSITAYFL
DANVKWMPDG AYAITPN
|
|---|
| |