| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2886 |
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| Symbol | |
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| ID | 3566291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3107699 |
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| End bp | 3108658 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637681355 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_286086 |
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| Protein GI | 71908499 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.014767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCA TTCTTCTCGC CCCGATGGAA GGGCTCGCCG ACGATTTGTT GCGCGGCGTG
CTGACCGATA TCGGCGGTTA CGACTGGGGC ATTTGCGAAT TTGTTCGTGT TTCGAACAGC
GTTTTGCCAG CGAAAACCTA CGAGCGGATT TGTCCGGAAC TGCTGAATGG CAGCAAGACT
CGGACGGGTA CGCCGATGCG TGTGCAACTG CTCGGCTCCG ACCCGCATTT CATGGCGGAA
AATGCTCGCC GTCTGGTGGC CCTGAACCCG GCTGGCGTTG ATCTTAATTT TGGTTGCCCG
GCGCCGACGG TGTTTCGTCA TCGCGGTGGT TCGGCGCTGC TCGGTGAGCC GGAACTATTG
AACGAAATCA CCAGCGCCGT GCGCTCCGTC GTCCCCGCCC ACATTCCATT TACCGCCAAG
ATGCGTCTCG GCATTGACGA TACCAGTCGG GCGATTGATT GCGCCCAGGC ACTGGAAGCC
GCCGGCATCA ACGAACTGAT CGTCCATGGC CGCACCCGAT CCGATGGCTA TCGCCCACCG
GCGCGCTGGG AGTGGATCGA CAAGGTGCGG GACGCCATCC ATATTCCACT GATCGCCAAT
GGCGAGGTCT GGACCGTCGA AGATTTCCGT AACTGCCAGC TGGCGACGGG TTGCGCCGAC
ATCATGGTGG GTCGCGGCGC GGTGGCTGAC CCGCTGCTGG CGCGACGGGT GCGCGGCGAG
GAAACCGGCG GCTGGGATGA GATCAGGCCC ACCGTGGCCA CCTACTGGCT GGGCGTGCGC
AAGAAAGTGG TGCCGGTGCA TGCCGGTGGC CGGGTCAAGC AGTGGCTGGC CATGATGCGG
CGAAATTATC CGGAGGCCGA GGTGCTTTAC GAACGTTTGC GGCCGATCAA GGGCGCTGCC
GACATCGATG CTGCGCTGAT TGCCGAAGGC CTCCTGACTC CTGAACAGTT GGCGGCATGA
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| Protein sequence | MSRILLAPME GLADDLLRGV LTDIGGYDWG ICEFVRVSNS VLPAKTYERI CPELLNGSKT
RTGTPMRVQL LGSDPHFMAE NARRLVALNP AGVDLNFGCP APTVFRHRGG SALLGEPELL
NEITSAVRSV VPAHIPFTAK MRLGIDDTSR AIDCAQALEA AGINELIVHG RTRSDGYRPP
ARWEWIDKVR DAIHIPLIAN GEVWTVEDFR NCQLATGCAD IMVGRGAVAD PLLARRVRGE
ETGGWDEIRP TVATYWLGVR KKVVPVHAGG RVKQWLAMMR RNYPEAEVLY ERLRPIKGAA
DIDAALIAEG LLTPEQLAA
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