| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2880 |
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| Symbol | |
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| ID | 3566285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3099426 |
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| End bp | 3100658 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637681349 |
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| Product | GGDEF |
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| Protein accession | YP_286080 |
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| Protein GI | 71908493 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 0.16195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGCCC CTCTGTTTCG ACCGATCGCC ACGACCCTGA TCCGCAGTGT GTTTTTGTGG
GCAACGTTAT GTGCCTTGGC CATTGGGTCT ATCCAGGCGG CTTATTCCTA CATTCATGTC
CAGGATCGTT TCGAGCTGGC AGTTCGGGAG ATCGGCCAGA CCAATGTGCC GCTGTTGTCG
GTCAGCATCT GGGACATTGA GCCTGAAGCG ATTCGAAGAC AGCTCGAAGT GATCGCTGCC
CGACCGGAGA TCGGCTACGT AAGTCTGACG GTAACCACCG GGCAGACTTT TTCGGCGGGA
GACAAAGGAC TGACTAACGA TCGGCCCCGG CGCTTTGATA TTCCGCCGCC CGGCCGGCCG
GTTGGCGTAA TCGGCAATCT GGAGATATTC GAGAACCCCG CTGCGTTTTA CCGAGAGCTT
ATTTACACGC TCGGTATCGC ATCGCTAGGG TATGGGGTGC TGACGCTACT TATCTGCATA
CTGATTGCCT ACCTGCTGAA GCGTGATCTG GAACGCCCGC TGCGCCGAGT GGCGCAATTC
GCCAGCGAAC TGACCCCAAA TCGTCTGACG ATTCCACTGG AATTGGCGCG TTCGCCTGGA
CACGGTCGGG ACGAAATCGA CTTGGTTGTC GAAGGTTTTT CCGTACTGCA GTCCGGGATC
AACAGCCACA TCGCGAATCT GGACGAGCAG GTCGCACAGC GAACGGCTGA ACTGGAGTCA
GCGCTGGCGG CTATCCATCG CCTGTCGACT ATTGATCCCT TGACCGGTTG CTTCAACCGT
CGCCTCTTCA ACGAGAGAAT CCAGGAGGAG CTTGATCGGG CGATCCGCTA TCAGCGCGCT
CTGGCAGTGA TTTTCTGCGA TATCGATCAC TTCAAACGGA TCAATGACAC TTGCGGGCAT
CTGCTTGGCG ATCAGGTCCT TCAGGAGGCC GCCGAGTGCT TCCGTCGGGA ATTGCGAGGG
CATATCGATT GGGTCGCCCG CTACGGTGGC GAGGAGTTCG TCATCGTTCT GCCCGAGACC
TCGCTGCCGG CAGCGATAGC GACTGCCGAG CGCCTGCGTC TGGCGCTGAC TGAAAGCATG
GTGGCCTTGC TTCCCGGCTT GACGGTGACG GCGAGCTTCG GCGTGACGCA GCATGTGCCT
GGTGAAACCG TTCAGGAGCT GCTTCAGCGG GCCGATAACC AGCTCTATGC AGCCAAGGCG
GCCGGGCGAA ATCAGACCTT GCCGAGGCTA TGA
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| Protein sequence | MSAPLFRPIA TTLIRSVFLW ATLCALAIGS IQAAYSYIHV QDRFELAVRE IGQTNVPLLS
VSIWDIEPEA IRRQLEVIAA RPEIGYVSLT VTTGQTFSAG DKGLTNDRPR RFDIPPPGRP
VGVIGNLEIF ENPAAFYREL IYTLGIASLG YGVLTLLICI LIAYLLKRDL ERPLRRVAQF
ASELTPNRLT IPLELARSPG HGRDEIDLVV EGFSVLQSGI NSHIANLDEQ VAQRTAELES
ALAAIHRLST IDPLTGCFNR RLFNERIQEE LDRAIRYQRA LAVIFCDIDH FKRINDTCGH
LLGDQVLQEA AECFRRELRG HIDWVARYGG EEFVIVLPET SLPAAIATAE RLRLALTESM
VALLPGLTVT ASFGVTQHVP GETVQELLQR ADNQLYAAKA AGRNQTLPRL
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