Gene Daro_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2878 
Symbol 
ID3566342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3097901 
End bp3098884 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content59% 
IMG OID637681347 
ProductBeta-lactamase-like 
Protein accessionYP_286078 
Protein GI71908491 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGTG CCGTTTCTTC ATTCATCGGC GGTTCGCTCC GCCACCTCTG TCTCGCCGCA 
CTGTTTCTAT TTGCCTCAAG TTTTGCCAAC GCCGAAGCGC CACAGCAAAA GACCCAAGTC
CCGGGCTATT ACCGGCTAAT GCTTGGCAAC TTCGAAGTCA CCGCGTTATA CGACGGTGCC
ATCGATCTCG ACGAAAAGCT GCTGAAGAAT ATCCAGCAGC GCGATATCCA GCGCCTGCTG
GCTCGCGAGT TCCTGAAGGG ACCGAAGGTA CAGACAGCGG TGAATGCCTA TCTGATCAAC
ACCGGCAGCA AATTGATCTT GGTCGACGCC GGTGCTGCCA AGCTGTTCGG GCCGGGCCTT
GGCAATATCG TCGATAACCT GAAAGCGGCC GGCTATGCAC CTGAGCAGGT GGATGTCGTG
CTGGTGACCC ATCTGCACGG AGACCACGTC AACGGCCTCG TTACGTCGGA AGGCCAACGT
GTTTTCGCCA ATGCAGAAAT CTGGTCCGCC AAGGCCGACA ACGATTTCTG GCTGAGCGAG
GAAATCGCCG CCAAGGCGCC CAAGGATTTC CAGCCCTTCT TCAAGATGTC ACGTGATGCC
GCCGCCCCTT ACCTTGCGGC CGGCAAGTGG AAAACCTTCG ACAGCGACCG CGAACTGCTG
CCCGGCGTCA CCAGCGTGGA CACGCACGGC CATACGCCGG GTCATGCCAG CTACCTCGTG
CAGAGTGGCG ACCAGCGCCT GATGATTCTC GGCGATCTGG TACATAACCA TGCCGTCCAG
TTTGCCCACC CGGATGTCGC CATCGAATTC GACAATGATC CGAAGCAAGC GGTCATCGCC
CGCAAGCGCA TCTTCCGCCT GGCAGCCAAG GAAAGACTGA TGGTGGCCGG CATGCATCTG
CCCTTCCCAG GCATCGGTCA CGTCCGCAAG GAGCAAAAGG GCTACGCCTG GGTGCCAGCC
GAATTTGCAC CGCTGGCCAA ATAA
 
Protein sequence
MPSAVSSFIG GSLRHLCLAA LFLFASSFAN AEAPQQKTQV PGYYRLMLGN FEVTALYDGA 
IDLDEKLLKN IQQRDIQRLL AREFLKGPKV QTAVNAYLIN TGSKLILVDA GAAKLFGPGL
GNIVDNLKAA GYAPEQVDVV LVTHLHGDHV NGLVTSEGQR VFANAEIWSA KADNDFWLSE
EIAAKAPKDF QPFFKMSRDA AAPYLAAGKW KTFDSDRELL PGVTSVDTHG HTPGHASYLV
QSGDQRLMIL GDLVHNHAVQ FAHPDVAIEF DNDPKQAVIA RKRIFRLAAK ERLMVAGMHL
PFPGIGHVRK EQKGYAWVPA EFAPLAK