Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2863 |
Symbol | |
ID | 3566327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3083173 |
End bp | 3084957 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637681332 |
Product | succinate dehydrogenase subunit A |
Protein accession | YP_286063 |
Protein GI | 71908476 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTATTC CTGTTCTCAA GTTTGATGCG GTGATCGTTG GTGCCGGTGG TGCCGGTCTG CGTTCCGCAA TCCAATTGTC CGAAGCTGGC CTGAAAACGG CCGTCTTGTC CAAAGTTTTC CCGACCCGTT CGCACACTGT TGCGGCGCAG GGCGGGGTTG CTGCCTCCCT TGGTAATTCC GAGGAAGATC ACTGGACGTG GCACATGTAC GATACCGTCA AGGGTTCCGA CTGGCTCGGC GACCAGGATG CGATCGAATT TATGTGCAAG AAGGCCAACG AAGTGGTCGT TGAGCTCGAG CACTACGGCA TGCCTTTTGA CCGTACCGAC GACGGCAAGA TCTACCAGCG TCCGTTCGGT GGTCACATGT CGAACTTTGG CGAAAAGCCG GTGCGTCGTT CCTGTGCTGC CGCTGACCGT ACCGGTCATG CCATGTTGCA CGCCATGTAC CAGCGCAACG TCAAGGCCAA CACCCAGTTC TTCGTTGAAT GGATGGCCCT TGACCTGATC CGTGACGAAG AAGGTCACGT CCTCGGCGTT ACCGCCATGG AAATGGAAAC CGGCCAGATC GTTATCTTCC ACGCTCGTGC CACGATTTTC GCCACCGGCG GTGCCGGCCG TATCTTCTAC TCGTCGACCA ATGCTTTCAT CAATACCGGT GACGGCCTTG GTATGGCGGC GCGTGCTGGC ATCCCGCTCG AAGACATGGA ATTCTGGCAG TTCCACCCGA CCGGCGTGGC CGGTGCTGGT GTGCTGATTA CCGAAGGTGT GCGCGGCGAA GGCGGCATTC TGCGTAATTC CAGCAAGGAA CGCTTCATGG AGCGCTACGC TCCGAACGCC AAGGATCTGG CGTCGCGTGA TGTGGTTTCG CGCGCCATGG CGACCGAAAT CAAGGAAGGC CGCGGTTGTG GCGTCAACAA GGACTACGTC CTGCTCGACA TCACCCATCT CGATCCAGCC ACTATCATGA AGCGCCTGCC GGGCATCCAC GAAATCGGCC TGCAATTCGC CGGTGTCGAT TGCCTGAAGG AACCGCTGCC GGTCGTGCCG ACCTGTCACT ACCAGATGGG TGGTATCCCA ACCCATTACT CTGGCCGTGT CGTCATGCCG AAGAATGGCG ACATGAACAG CGTCGTTCCT GGTTTCTATG CCGGTGGCGA GTGTGCCTGT GCTTCGGTGC ACGGTGCCAA CCGTCTCGGT ACCAATTCGC TGCTCGATCT GCTGGTCTTC GGCAAGTCGG CCGGCGACTC CGCGGTCGAA GATCTCAAGG CTGGCCGCGC CCATCGCGAA CTGCCGAAGG ACGTCGCCGA CAAGACTCTG GCTCGCATCA GCGCACTGGA CAACCGCAAG GGCGGTGCCA ACGTGCACGA AACCCGTCTG GCCATGCAGC GCACCATGCA GGACCACGCC GGTGTGTTCC GTTTTGGCGA CATGCTGAAG CAGGGCGTCG AGAAGATCCT CGAAGTCGAA AAGGCAGCTC GCCAGCTCGA GATCAAGGAC AAGTCGATGG CCTGGAATAC GGCTCGTACC GAAGCGCTCG AAATGGAAAA CCTGATCGAA GTCGCCAAGG CCACGATGAT TTCCGCCGAA GCCCGCAAGG AATCCCGTGG TGCTCATGTT CGTGACGACG CGCCGGATAC CGCCGAGTTC CCGAATGGCC GTAACGACAA GGAATGGCTG AAGCACACGC TGTTCTCGCC GGTTGATAAC TCGATCAGCT ACAAGCCGGT CAACATGCAA CCCCTGACCG TCGAGGCCGT AGCCCTCAAG ACGCGCTCGT ACTAA
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Protein sequence | MSIPVLKFDA VIVGAGGAGL RSAIQLSEAG LKTAVLSKVF PTRSHTVAAQ GGVAASLGNS EEDHWTWHMY DTVKGSDWLG DQDAIEFMCK KANEVVVELE HYGMPFDRTD DGKIYQRPFG GHMSNFGEKP VRRSCAAADR TGHAMLHAMY QRNVKANTQF FVEWMALDLI RDEEGHVLGV TAMEMETGQI VIFHARATIF ATGGAGRIFY SSTNAFINTG DGLGMAARAG IPLEDMEFWQ FHPTGVAGAG VLITEGVRGE GGILRNSSKE RFMERYAPNA KDLASRDVVS RAMATEIKEG RGCGVNKDYV LLDITHLDPA TIMKRLPGIH EIGLQFAGVD CLKEPLPVVP TCHYQMGGIP THYSGRVVMP KNGDMNSVVP GFYAGGECAC ASVHGANRLG TNSLLDLLVF GKSAGDSAVE DLKAGRAHRE LPKDVADKTL ARISALDNRK GGANVHETRL AMQRTMQDHA GVFRFGDMLK QGVEKILEVE KAARQLEIKD KSMAWNTART EALEMENLIE VAKATMISAE ARKESRGAHV RDDAPDTAEF PNGRNDKEWL KHTLFSPVDN SISYKPVNMQ PLTVEAVALK TRSY
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