| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2862 |
|---|
| Symbol | sdhB |
|---|
| ID | 3566326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3082450 |
|---|
| End bp | 3083160 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637681331 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_286062 |
|---|
| Protein GI | 71908475 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAC GCATGGTTCA ATTCAGTATC TATCGCTACG ATCCGGACAA GGACGACGCG
CCGTACATGC AGGACATCTC GGTCGAACTC GAACCGACTG ATCGTAAGCT GCTGGACGCG
CTGACCAAGC TGAAGGCTAA GGACGACGCG ATTTCCTATC GACGCTCCTG TCGCGAAGGC
GTTTGTGGCT CCGATGCCAT GAACATCAAC GGCAAGAATG GCCTGGCCTG CCTGACCGAT
ATCGACAGCC TGAAGCAGCC GATCGTGCTG CGTCCGCTGC CCGGTCTGCC TGTCATCCGC
GATCTGATCG TCGACATGAC CCAGTTCTTC AAGCAGTACC ACTCGATCAA GCCATACCTG
ATCAACAACG ATCCGCCGCC GGAACGCGAA CGTCTGCAGT CGCCGGAAGA TCGCGAAGAG
TTGAATGGTC TTTATGAGTG CATCCTGTGT GCCTGCTGCT CGACGTCCTG CCCATCGTTC
TGGTGGAACC CGGACAAGTT TGTCGGCCCG GCAGGCCTGC TGGCAGCATA CCGTTTCATC
GCCGATACGC GCGACCAGGC GACCAATGAG CGTCTCGACA ACCTCGAAGA CCCGTACCGC
TTGTTCCGTT GCCATACCAT CATGAATTGT GTTGACGTGT GCCCGAAGGG TTTGAACCCG
ACTAAGGCCA TTGGCAAGAT CAAGGACATG ATGGTTCGTC GCGCTGTCTG A
|
|---|
| Protein sequence | MSKRMVQFSI YRYDPDKDDA PYMQDISVEL EPTDRKLLDA LTKLKAKDDA ISYRRSCREG
VCGSDAMNIN GKNGLACLTD IDSLKQPIVL RPLPGLPVIR DLIVDMTQFF KQYHSIKPYL
INNDPPPERE RLQSPEDREE LNGLYECILC ACCSTSCPSF WWNPDKFVGP AGLLAAYRFI
ADTRDQATNE RLDNLEDPYR LFRCHTIMNC VDVCPKGLNP TKAIGKIKDM MVRRAV
|
|---|
| |