Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2847 |
Symbol | |
ID | 3566409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3062612 |
End bp | 3064906 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637681316 |
Product | PAS |
Protein accession | YP_286047 |
Protein GI | 71908460 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.445085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0351705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCC TCGTTGTCGA TGCCACGCAT CTTTACCGGG ACATCCTGCA GCGGGCATTG GGCCATTATG CGGATGTCCG GGTCGAACTC GCCTTGTCGC AACAGGAAGC GCGCGAGATT GTCGCCCGCG AGACCTTTCA TTTCTTCATT ATTTCCGGGC AACTGCCGGA TGGTGATGGC ATCGAGCTGG CCAAAGCCTT GCGTGCCGAT GGCAGGGCCA AGGCTGAACC GATCGTCTTG CTGACGTCGA GCGCCAGCTC CGGCCTGGCA ACACAGGCTG AACAAGCTGG TGTGAGCGAG CTTTTCCGCA AGCAGGATAT CGACGAACTG CTTCGTTTCA TGCGGCATTA CGTTGAGTTG CTGCAGCCGA TGCGTTGCCG GATTCTTTAT GTTGAGGACA GCAGGGATCA GCGCGCCCTG CTTGAAGCCC AGTTGCGCGA CTGGGGCATG ACGGTCGATG CGTTTGCCTC GGCTGACGAG GCGTGGCTGG CTTTTGAAGC CAATGATTAC GATCTGGTGT TGTGCGATGT CGTCCTGGGT GGGCACATGA CCGGCACGCG CTTGATCAAC CGGATTCGTC GCTTGCCTTT ACCCAAGGGT GAAACGCCGG TTCTGGCGGT GACAGCTTTT GACAATCCGT TGCGGCGAAT CGAGTTGTTC CAGCTCGGGG TCGACGATTA TGTGCAGAAG CCGATCCTGG CCGAGGAAAT CCGTGCCCGG CTTCACAATT TGCTGACCCG CAAGCGTGCC GTCGAGCGCA GCCAGATGTT GCTGGCGGCC ACGGCGCTTG GCGTCGTTGT TGTCGGTCAG GACGCAGTGA TCGAGTCGAT GGACGATAAC TCGCTCGACA TGTTCCGGCC TGCAACGCAA CCGGTGCTCG GTCAGCCCCT GTCGATATTG CTGCCGGAAG AAAAAAATCC GGGCTTGCTC GGTCAGATGA TGCAACGCGT CATGGCCGAA GAACGTATTT CCGGCCTCAA GGCGGTGGGG CAACGGGGCG ACGGGGAAGA TTTTCCGGTT GAATTGACGA TCATCGAGAT TAATTCCGGT GATGGCGTAC GTCATTTTGC CCTGCTGGCG CGTGACATCA GTGAAGAGCA GGCGCTGGCG ACTTATCTGA CCCGGGCTTC GGAGGCGGCT GAGCGCGCCG AGCAGATGAA GACGGCTTTC CTGGCCAACA TGAGCCACGA GATTCGCACA CCGCTCAATG CCATTATCGG CATGGCCCAT ATTCTCTCGC GCACCGAACT GGATACTGCC CAGAAAAAGT ATGTTGGTCA CATCGATGCG GCAGGCGAGC ACCTGCTCGG CTTGATCACC AACGTACTTG ATATGTCCAA GATAGAGGCC GGCCGGCTGG AGCTGGAAAA TATTCCGCTG GCCGTTGAGA ACATCGTTTT CGAAGTTCTT TCGATGGTTG CCGATCAGGC TGCGGAGAAG GGGTTGGACG TGCGGATTGG TGAGTTGGAC GCTCCGTCCG GGCTGGTTGG TGATCCGGTC AGGCTCAGGC AGGCCTTGCT CAACTATGTT TCAAATGCCA TCAAGTTCAC TGCAGATGGC AGCATTGATG TTCGGGTTAT TACGCAGGCG GTCAGCGAGG ATTCGGTCCT GCTTCGCTTC GAGGTAGCCG ATACAGGGAT TGGCATCAGT GCGGAAGCCA GGGATGAGAT ATTTTCGGCC TTTCGCCAGG CCGATAATTC GACCACCCGC CGTTATGGCG GGACCGGCCT CGGCTTGGCA ATCACACGCC AGTTGGCTGA GCTGATGGGC GGCGAGGTTG GCGTTTCAAG TACGCCCGGG CAGGGTAGCC TGTTCTGGTT CACTGCTTCT CTGAAACGCG CTTCTGCGCC GCTTGCTCGG CCGGCGATCC CCTTGCTATC AGCGGAGAGC GCGGAAGTTG TCTTGGCCAG GGATTTTGCG GGGTGTCGTT TTTTGCTCGT CGAGGATGAG GTTATCAATC GACATGTGGC CGAGGCCATC CTTTCGCGCC TGAACTGCGA GATCGATACC GCGAAGGATG GCCGTGAGGC CGTCGATCTG GCCAGTCGCA ACGACTATGC ACTGATCCTG ATGGACATGC TGATGCCCAA CATGGGGGGG CTGGAGGCCA CGCAGTGCAT TCGACAACTG CCGGGGGGCG AGAAGGTGCC GATTGTCGCC CTGACGGCCA ACGCGTTCGC CTACGAAAAG CAGCGCTGCC TGGATATCGG GATGAATGGT TTTGTGACCA AGCCGATCCG GCCCGAGGTG CTATTCGAGA CCATGCTGCG CTGTCTGAAC GGCGAAGGGG TTTAA
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Protein sequence | MNILVVDATH LYRDILQRAL GHYADVRVEL ALSQQEAREI VARETFHFFI ISGQLPDGDG IELAKALRAD GRAKAEPIVL LTSSASSGLA TQAEQAGVSE LFRKQDIDEL LRFMRHYVEL LQPMRCRILY VEDSRDQRAL LEAQLRDWGM TVDAFASADE AWLAFEANDY DLVLCDVVLG GHMTGTRLIN RIRRLPLPKG ETPVLAVTAF DNPLRRIELF QLGVDDYVQK PILAEEIRAR LHNLLTRKRA VERSQMLLAA TALGVVVVGQ DAVIESMDDN SLDMFRPATQ PVLGQPLSIL LPEEKNPGLL GQMMQRVMAE ERISGLKAVG QRGDGEDFPV ELTIIEINSG DGVRHFALLA RDISEEQALA TYLTRASEAA ERAEQMKTAF LANMSHEIRT PLNAIIGMAH ILSRTELDTA QKKYVGHIDA AGEHLLGLIT NVLDMSKIEA GRLELENIPL AVENIVFEVL SMVADQAAEK GLDVRIGELD APSGLVGDPV RLRQALLNYV SNAIKFTADG SIDVRVITQA VSEDSVLLRF EVADTGIGIS AEARDEIFSA FRQADNSTTR RYGGTGLGLA ITRQLAELMG GEVGVSSTPG QGSLFWFTAS LKRASAPLAR PAIPLLSAES AEVVLARDFA GCRFLLVEDE VINRHVAEAI LSRLNCEIDT AKDGREAVDL ASRNDYALIL MDMLMPNMGG LEATQCIRQL PGGEKVPIVA LTANAFAYEK QRCLDIGMNG FVTKPIRPEV LFETMLRCLN GEGV
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