| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2841 |
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| Symbol | |
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| ID | 3566403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3055420 |
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| End bp | 3057564 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637681310 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_286041 |
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| Protein GI | 71908454 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.0729826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.310526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGCA AACACTTCAT ACCACGCGTG TCTGATGGGT GGAATTTTGT TCAGTCGGGT
AGCAGCCACG GCTCCGCCTT GCTGCAGGCG CCAGCCATGG CGACCTTGTT TTCCAAGCTC
GATGGCATGC TGTTCCGCTG CCTGCTTGAT GAGTACTGGA CACTGTTGTC GGTCAGTCCC
GGCTGTCATG AACTGACCGG ATTTCGGGCC GATGATCTGG TTGGCAAGCA GCAGAATTCG
CTTGAGTCAC TGGCCCATCC GGAGGACCGG GCGGCGGTTC GCGGCACAAT CCTGGCGGCG
CTGGAGACTG GCTCGCGCTA TAGCATTGAG TACCGCATCG TCTGCCGGGA TGGTGAGGAG
AAATGGGTAC AGGAGCGCGG CGTTGGTTTG CGCGACGAGG CTGGTCGCCA GGTACTGGAA
GGCTATCTGG AAGACATTAC GGATCGCGTC CAGGCCCAGA TCCAGTTAAC AGAAACGGAG
CTGCGCTATC GCAGCATTTT TGAAAATTCG GTGGTCGGCA TGTTTCAGAG CACCGAGAGC
GGTCGTTATT TGGCGGCCAA TCCGGCCCTG GCCAGGCTTT ATGGGTATTC GACGCCGGAG
GCGCTGATCA GCAGTCTGGC CGATATTGCC AGTGGGCTGT ATGTCGATCC GCAGCGGCGC
GAGGATTTCA AGCAGTTGAT CCAGCGCGAT GGCCGGGTCA CCAATTTCGA GTCGGAGATC
ACCTGTCGCG ATGGCAGCCG GATCTGGATC GCCGAGCATG CCCATGCCGT TCGATCGGCC
GACGGGTCTT TTCTCTATTA CGAGGGAACG GTCGAGGATA TTACCGAGCG CCATCGTTAC
CAGTCGGTGC TGCAGCACCA GGCAACGCAT GATCCACTGA CCGGGTTGCC CAACCGCAAC
CTGCTGGAGG ACCGCCTGGC CCAGGCAGTG CAACTGGCAC GGCGCAAGAG CAGCAAGGTG
GCACTGGCCT TTGTCGATCT CGATAACTTC AAGGTGATCA ACGACAGCCT CGGTCATGCC
GCCGGCGATC AGTTGCTGAT TGAAATCTCC AGTCGTTTGC GCGCCGCCTT GCGCGGCCTT
GATACCGTGG CCCGCTACGG TGGCGACGAG TTCGTGCTGA TCCTCGGCGA ACAGACCTCC
ATGGCCGACA CCATGCACCT GCTTGAGCGC GTGCTGGTCA GCATTCAGGC ACCGCTGGCG
CTGGAAGGGC ACGGCCTGCG CATCAACTGC AGCATCGGCG TCAGCGTCTT TCCCGACGAT
GCGCAGGATC TCGACGGCCT GTTGCGGGTG GCCGATGTCG CGATGTATCA CGCCAAGGAA
AGTGGCAAGG GGCAGTACTG TTTCTATACC CGCGATCTGA ACCAGGCCGC TCAGGATCGG
TTTTCGCTGG AAACAGCGCT CGGCAGCGCC ATCGAAAACA ATGAACTGAC TGTCGTCTAC
CAGCCGAAGG TGGATGGCGA GGGCATGGTC CGCGGTTTTG AGGCGCTGGT CCGCTGGAAT
AGCGCCGGCC GGGGGCTGGT CACACCCGAC CGCTTCATTC CGCTGGCTGA GGAAACCGGG
CAGATTCTGG CGATCGGTGA GCAGGTGCTG TATGCCGCCT GCCGGACGGC CGCCAACTGG
CCGCTAATCG ATGGCCAGGC CTTGAGTGTG GCCGTTAACC TCTCGGCACG ACAGTTGCGC
GAACCCGGTT TGCCGGGGTT GGTGGCCGAT GCACTGGCGG TTTCCGGCCT GCCGCCGGAA
TGCCTGGAAC TTGAAGTCAC CGAGAGCATG ATCATGGGCG ACATGGAGCA CAACATCCGG
GTGCTCAAGT CGATCAAGGC GCTCGGCGTG CGCATCGCGG TCGATGACTT CGGCACCGGC
TATTCGTCGC TGGCCTATCT GCAGCGGCTG CCGATCGATA CGCTGAAGAT CGACCGTTCC
TTCGTTTCCG GCTGCAACCG TGGTGGCAAG GCGATGGCAA TCCCGCATGC CATCATTTTC
CTCGGCAAGA CGCTGGATCT GCATATTGTC GCCGAAGGGG TCGAAACCGA CGAGGAACGG
GCGATTCTGG CAGTTTGCGG CTGCAACGAG TTCCAGGGCT ACCTGTTTTC CCGGCCGCTG
CAGAGTGCGG CAGTCGATAC CTATTTGCAG GCAAAAATCG GCTGA
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| Protein sequence | MFRKHFIPRV SDGWNFVQSG SSHGSALLQA PAMATLFSKL DGMLFRCLLD EYWTLLSVSP
GCHELTGFRA DDLVGKQQNS LESLAHPEDR AAVRGTILAA LETGSRYSIE YRIVCRDGEE
KWVQERGVGL RDEAGRQVLE GYLEDITDRV QAQIQLTETE LRYRSIFENS VVGMFQSTES
GRYLAANPAL ARLYGYSTPE ALISSLADIA SGLYVDPQRR EDFKQLIQRD GRVTNFESEI
TCRDGSRIWI AEHAHAVRSA DGSFLYYEGT VEDITERHRY QSVLQHQATH DPLTGLPNRN
LLEDRLAQAV QLARRKSSKV ALAFVDLDNF KVINDSLGHA AGDQLLIEIS SRLRAALRGL
DTVARYGGDE FVLILGEQTS MADTMHLLER VLVSIQAPLA LEGHGLRINC SIGVSVFPDD
AQDLDGLLRV ADVAMYHAKE SGKGQYCFYT RDLNQAAQDR FSLETALGSA IENNELTVVY
QPKVDGEGMV RGFEALVRWN SAGRGLVTPD RFIPLAEETG QILAIGEQVL YAACRTAANW
PLIDGQALSV AVNLSARQLR EPGLPGLVAD ALAVSGLPPE CLELEVTESM IMGDMEHNIR
VLKSIKALGV RIAVDDFGTG YSSLAYLQRL PIDTLKIDRS FVSGCNRGGK AMAIPHAIIF
LGKTLDLHIV AEGVETDEER AILAVCGCNE FQGYLFSRPL QSAAVDTYLQ AKIG
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