Gene Daro_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2828 
Symbol 
ID3566468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3037636 
End bp3038520 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content61% 
IMG OID637681297 
Producthypothetical protein 
Protein accessionYP_286028 
Protein GI71908441 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value0.474129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATC TGTTCGCCAA CCCCTATCTG TTGCTGACCC TGACCGTCCT TTCCTGGTCC 
GGCAACATGG TCATCGGCCG CGGTGTGCGC GGCGACATTC CACCGCTGAC CTTTGCCTTC
TGGCGCTGGG TGATTGCCTT CGCCCTGATT CTGCCACTGG CCCTGCCGCA CCTGAAAACG
CAGTGGCCGC TCCTGAAGAA AGGCTGGAAA CCCTTGCTGG TGCTCGGCCT GCTCGGTGTC
GGCGGCTACA ACACCTTTGC CTATCTGGCC CTGCAGGACA CCACGGCGAC CAATGCCGCG
CTGCTCAACT CCTTCATCCC GATCGCCACC ATCGCCATCT CCTGGGCCTT TCTCGGCAAG
CACCTGCGCC GGATCGAGGG TATCGGGGTC GTCGTCTCGC TGTGTGGTGC GATGACCATC
ATCTCGCGTG GCGATATTGC CGTATTGGCT CACCTCAACC TCAACGTCGG CGACGTCTGG
ATGCTGGTCG CCGTGCTCGA CTGGGCGATC TATACGGTCG CCCTCGCCTG GCGCCCGGCG
GGGGTGCACC CGATGCTGAT GCTCGGCGCC ACGACCATCA TCGGCCTCAG CGCGCTGGCC
CCGGCCTATG CCTGGGAAAT GGCCCAGGGG CGGGTCATGA ACATCCATTT TGGATCGCTC
TCGGCACTGG CCTACGTTGG CATCTTCCCC AGTTTCCTCG GCTACATTTT CTACAACAAG
GGCGTGGCCG AAGTCGGCCC GAACAAGGCC AGCCTGTTCA TCCATCTGAT GCCGGTCTTT
GGCACCCTGC TCTCCTTCCT GTTCCTCGGC GAAATACCGT TCTGGTACCA CTACCTGGGC
ATCGGGCTGA TTTTTACCGG CATCTGGCTG ACCACAAAGA GATGA
 
Protein sequence
MKNLFANPYL LLTLTVLSWS GNMVIGRGVR GDIPPLTFAF WRWVIAFALI LPLALPHLKT 
QWPLLKKGWK PLLVLGLLGV GGYNTFAYLA LQDTTATNAA LLNSFIPIAT IAISWAFLGK
HLRRIEGIGV VVSLCGAMTI ISRGDIAVLA HLNLNVGDVW MLVAVLDWAI YTVALAWRPA
GVHPMLMLGA TTIIGLSALA PAYAWEMAQG RVMNIHFGSL SALAYVGIFP SFLGYIFYNK
GVAEVGPNKA SLFIHLMPVF GTLLSFLFLG EIPFWYHYLG IGLIFTGIWL TTKR