Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2827 |
Symbol | |
ID | 3566467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3035302 |
End bp | 3037524 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637681296 |
Product | RelA/SpoT protein |
Protein accession | YP_286027 |
Protein GI | 71908440 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.00393712 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCCG TTGTCCATTC CGTCGCCGCC ACGAGCGACT TCGAACAGTT CCTCGTCACC TTGACTGACG GGGTTCCTCC TGCTGATGCC GAGCGCCTGA AAAAGGCCGT TGAATACGCC TGGGAAGTCT ATGGCGACCG GACGCTGGGT AGCGGTGAAC GCATCTGGTC GCACGCGCTG GGCATGGCGG TCATCATTGC CGGACTCAAG CTTGATGTCG AGTCGCGCAT TGCCGCCGTG CTCTTCGCCA TCCCGTCCCA TGACGAGCAT GGCATTACCA GTATCGAATC GCGTTTCGGC AAGCCGGCTG CCCATCTGGT GCATGGCATT TCCCGACTCA ACAGGTTGCG GCCAATTACC AAGGGTTTCG TTGCCATCAA CATCGAGGCT GGCGAGATCA ATCCGGCGGA GATGAAGGCG CAGGTCGAAG TGTTGCGCAA GATGCTGCTC GCCATGGTCG AGGACATCCG TGTCGTGCTG CTGCGTTTGG CCAGCCGGAC GCAGACCTTG CGCTTCTATG CGGCACATCC GGATGAACTG CGGGTGCAGG TGGCACGCGA AACGCTGGAA CTGTATTCGC CGCTGGCCAA CCGGCTCGGG GTCTGGGAAC TTAAGTGGGA ACTGGAGGAC TTGTCCTTCC GCTTCATCCA TCCGGATACC TACAAGAAAA TTGCCAAGAT GCTGGACGAG AAGCGCAGCG AGCGCGAGAA GTTCATCGTC GATGCGGTGG CGCGAGTCCG TGGCGAACTC GAAGCTGCCG GCGTCAAGGG GGCTGAAGTC TATGGCCGTC CGAAGCATAT CTACAGCATC TGGAACAAGA TGCGGAAGAA GGACGTCGAG TTTTCCGAGG TCTATGACGT TCGCGCTCTG CGCATCATCG TCGATGACCT GAAGGACTGC TACACCGCGT TGGGTATCGT GCACAACCTG TGGCTGCCGA TTCCCAGGGA GTTCGATGAT TACATCTCGA ACCCCAAGGG CAACTACTAC CGTTCGCTGC ATACGGCAGT GCGCTGCCCG GATGGCCGCA GTCTGGAAAT CCAGATTCGT ACCGCCGAGA TGCACAAGCA TGCCGAACTC GGCGTTGCCG CGCACTGGCG CTACAAGGAA GGCAGCAAAC GGACGACCGA GGATGACTAC GACGAGAAGA TCGCCTGGTT GCGCCAACTG CTGACCTGGA AGGACGAAGT CGCCGACAGC TCGGACTGGG TCAAGCATTA CAAGCAGGCG GCGCTCGACG AAACGATTTA CGTCATCACG CCGCAGGGCA AGGTCGTCGA TTTGCCGGCC GGTTCGACAC CGATCGATTT CGCCTATCGC GTCCATACCG ATCTTGGCCA TCGTTGCCGG GGCGCCAAGG TCGGCGGCCA ACTGGTGCCA CTCAATACCT CGCTGGAAAC CGGGCAGGAA GTCGAGATCG TCACCGCCAA GGTGGGCGGG CCGTCACGCG ACTGGCTGAA TCCCGGCCTC GGTTATATCC ACACCAAGAG CGCCCGGGTC AAGGTGCGGG GCTGGTTCTC CAACCTGGCA CTGGAAGAAA CCTTGTCCGA GGGGCGCGGC CTGATCGGCA AGGAATTGCA GCGGGCCGGG CAGACCGGGG CGAACATCGA GGAATTGTCC CACAAGCTGG GCTTTGCCAA GGCCGATGAC CTGTATATTG CCGCCGCACG CGGCGACCTG AACCAGCGGC AATTCCAGGC CGTGGCCAAG GGCGGCGACC TGCTGGCCGA AACGCAGTTG CCCGATGAGG TGATCGCCAA ACCGAGCAAG CCGGTCGCCG GCAATCAGGG CATCCTGATC GTCGGTGTCG ACAAGTTGCT GACCCAGTTG GCCCGTTGCT GCAAGCCGGC GCCGCCGGAC GAGATCCAGG GGTTCATTAC CCGTGGCAAG GGGATTTCGA TCCACCGCAT GGATTGCCCC AATTTTGCCA ATCTGGCCGC CCTGCATCCC GAGCGGGTCA TCGAGACGGA CTGGGGGCTG CAGACCACCG GTGTTTTTGC CTGCGACATC ATTGTCGATG CACATGACCG CCAGGGTTTG CTGCGCGATA TTTCCGAGAT ATTCACCCGG GAGAGGCTCA ATGTCGTCGG CGTCAACACC CAGTCCAAGC AGGGCAAGGC GCACATGAGC TTTACCGTCG AAATTACCAA TCTGCAGCAA TTGCAGCGCA CGCTGACGCT GGTCCACGAC GTCGAAGGTG TCGTCGGCGT GCGGCGTGCC TGA
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Protein sequence | MVSVVHSVAA TSDFEQFLVT LTDGVPPADA ERLKKAVEYA WEVYGDRTLG SGERIWSHAL GMAVIIAGLK LDVESRIAAV LFAIPSHDEH GITSIESRFG KPAAHLVHGI SRLNRLRPIT KGFVAINIEA GEINPAEMKA QVEVLRKMLL AMVEDIRVVL LRLASRTQTL RFYAAHPDEL RVQVARETLE LYSPLANRLG VWELKWELED LSFRFIHPDT YKKIAKMLDE KRSEREKFIV DAVARVRGEL EAAGVKGAEV YGRPKHIYSI WNKMRKKDVE FSEVYDVRAL RIIVDDLKDC YTALGIVHNL WLPIPREFDD YISNPKGNYY RSLHTAVRCP DGRSLEIQIR TAEMHKHAEL GVAAHWRYKE GSKRTTEDDY DEKIAWLRQL LTWKDEVADS SDWVKHYKQA ALDETIYVIT PQGKVVDLPA GSTPIDFAYR VHTDLGHRCR GAKVGGQLVP LNTSLETGQE VEIVTAKVGG PSRDWLNPGL GYIHTKSARV KVRGWFSNLA LEETLSEGRG LIGKELQRAG QTGANIEELS HKLGFAKADD LYIAAARGDL NQRQFQAVAK GGDLLAETQL PDEVIAKPSK PVAGNQGILI VGVDKLLTQL ARCCKPAPPD EIQGFITRGK GISIHRMDCP NFANLAALHP ERVIETDWGL QTTGVFACDI IVDAHDRQGL LRDISEIFTR ERLNVVGVNT QSKQGKAHMS FTVEITNLQQ LQRTLTLVHD VEGVVGVRRA
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