| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2803 |
|---|
| Symbol | |
|---|
| ID | 3566555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3010652 |
|---|
| End bp | 3011896 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637681272 |
|---|
| Product | Outer membrane efflux protein |
|---|
| Protein accession | YP_286003 |
|---|
| Protein GI | 71908416 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 0.438636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTG CCCCGATCTT GCTGCTGGGT CTGGCCTTCA GCGCTTTCGA CACCCTGGCG
GCCGAAGCCA CCCCGGAACT TCCGCCCACC GAAATCGTCG CCCGCGTCCT GCGTGACAGT
CCGATGGTAC AAGCCGCCAG CGGCCAGATT CGGGTCGAGG AAGCCAACCG CAATCGCCTC
GAAGCCGGCC AGTACGAATG GAACGTCCGG CTCGGCAGCC AGCAGCGCCG GACCAATCCG
ATCACCGGCC CCGACGAGCG TTTCACCGAA TGGAATGCCG CCATCGAACG CCCGCTCCGC
CTGCCCGGCA AGGGCTCGCT CGACGGTCAG CTCGGTGCCG CCGGTGTCGC GCTGGCCGAA
ACCGCGCATG GCGATGCCTT GCACGAAAAC AGCCGTAACC TGCTGAAATC GTGGTTCGTC
TGGCTCAAGG AAAACGCCGC TGCCAGCCAA TGGACCGAGC AGCTTTCACT GCTGGAAAAT
CAGAACAAAG CCATTCAGCG CCGCCAGCAA CTGGGCGATG CCGCCCGCCT CGAAGCCATC
CAGGCCGAAG CCGCCCTGGC CCAGGCCCAG GCGCAACTGG CCCAGGCCCG GGTGCGCCAG
CAGACGGCCG GCGAAGACCT GCGCCGCCGC TACCCGGGCT TGCCGCTGGT CGCTCCCGGG
ACCATCTCCG AGCCGACGCC GATTGAGGGC AGTGAGAGCG AGTGGATAAA TGAGATCCTC
GAACACAGCC ACGAACTCGA ACTGGCCCGT GGCGAAACCC AAAGGGCGCA GATCGTCGCT
GGCCGCGCCG GCCGCGATCG CCTGCCCGAT CCGACCGTTG GACTTCATGT TTCCCGCGAA
CGGGCCGGGG AGGACAGGAT TGTCGGCGCC TACATCAGTA TCCCGCTACC GGGCGGCGCC
CGCCGCGCCA GTTCCGACGC TGCGCTGGCC CAGGCCGATG TCGCCGGACG CCGTGAAGCC
GGGACAACCC AGAAGATCAC GGCCGAATCA GCCATGCTTT ACCAATCGGC CAGCGCCGCT
TTCGCCACCT GGCAAGCCAG CCGCAATGCC GCCGACCGCC TGAGCCAGGC CGCCAACATG
ACTGCCCGCG CCTACCAGCT CGGCGAAGGC AGCCTCAACG ATCTGCTGAC AGCTCGCCGC
CTGGCCAACG AAGCACAGCT CTCGCAGCGC CTGATGCAAC TCGATGCACT CGAACTGCGC
TACCGGATGT TGCTCGATGC GCATCGCTTG TGGGATCTGG ATTAA
|
|---|
| Protein sequence | MKLAPILLLG LAFSAFDTLA AEATPELPPT EIVARVLRDS PMVQAASGQI RVEEANRNRL
EAGQYEWNVR LGSQQRRTNP ITGPDERFTE WNAAIERPLR LPGKGSLDGQ LGAAGVALAE
TAHGDALHEN SRNLLKSWFV WLKENAAASQ WTEQLSLLEN QNKAIQRRQQ LGDAARLEAI
QAEAALAQAQ AQLAQARVRQ QTAGEDLRRR YPGLPLVAPG TISEPTPIEG SESEWINEIL
EHSHELELAR GETQRAQIVA GRAGRDRLPD PTVGLHVSRE RAGEDRIVGA YISIPLPGGA
RRASSDAALA QADVAGRREA GTTQKITAES AMLYQSASAA FATWQASRNA ADRLSQAANM
TARAYQLGEG SLNDLLTARR LANEAQLSQR LMQLDALELR YRMLLDAHRL WDLD
|
|---|
| |