| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2800 |
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| Symbol | |
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| ID | 3566745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3006201 |
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| End bp | 3007271 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637681269 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_286000 |
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| Protein GI | 71908413 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 0.278622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTAT CCTATCGTTG CTTGCTGCTT CCCCTCTTCG CTTTCATCGG CTGCGCCTCG
GCGGGTGAAA CGCTCGTCCT TCAGGCGGCG CAGATCAAGG CACTCGGCGT CGAGACTGCC
ATCGCCAGCC AGGGCGGCTC GGCCGGCGGC CTGTTGCCGG CCCGCGTGCT GGTTCCCAAT
GAGCAGATGC GGGTCGTTGC GGCCCCCGTC GGAGGCATGG TCGAAATGCT GGCCGTTGCC
CCCGGTGCTA CCGTCAAGCG CGGCCAGGTC GTGGCCCGAC TGGCCAGCCC ACAAGCGCTG
GAATTGCAAC GCGACGCGCT GCAGTCAGGT AGCCAGGCGG CGCTGCTGCA ACAAAGCCTG
AAGCGCGACG AACAGCTTTT TGCCGAAGGC CTGATTGCCG AATCCCGCCT GCAAGCAACC
CGTGCCGCCT CAGCCCAAGC TTCAGCCCAG GCCAGCGAAC GCCGCCAGGG CCTCGCGCTC
GCCGGGGTTG CCCCGGGCAA GCTGGGTGGC CCGCTGGCGC TAACGGCTGC CATCGATGGC
GTGGTACTAG AACAAGGTGT CCAGCTCGGC CAGCGCGTCG AAACCTCGGC GCTGATCTAC
CGGATCGCCA AGCTCTCCCC CCTGTGGCTG GAAATCCAGG CGCCGGTGGA GCTTGCAGCG
ACGCTAAAAG AAGGAAGCAC GCTCAAGATC GCGCGCAGCG AAGTGGTCGG CAAGCTGATC
GCCATTGGTC GTGCTGTCGA TGCAGCCAGC CAGACCGTGT TGCTGCGGGC CGAAGTCGGC
AAGGGGGCCG AGATGCTGCG GCCCGGACAA GTCATCGAGG TTGAAATCGC CGCGCCAGCC
GGCCAGCAGC AACGCCTGCC CGCCTCGGCG TTGGCCCGCA ATGAAGGGAC AACCGTCGCT
TTCGTCCAGA CGGCCAGCGA CGACAAGGGA ACGAGCTTCG AGGTGCGCCC GGTCCGCATC
ATCAGCCAGG GCGGCGACAG CGTCACCGTC GATGGCATCA AGGCCGATGA AAAGATCGCC
ATCAAGGGCA TTTCCGGCCT GAAGGCCATG TTGACGGGCG TGGGCAAATA A
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| Protein sequence | MPVSYRCLLL PLFAFIGCAS AGETLVLQAA QIKALGVETA IASQGGSAGG LLPARVLVPN
EQMRVVAAPV GGMVEMLAVA PGATVKRGQV VARLASPQAL ELQRDALQSG SQAALLQQSL
KRDEQLFAEG LIAESRLQAT RAASAQASAQ ASERRQGLAL AGVAPGKLGG PLALTAAIDG
VVLEQGVQLG QRVETSALIY RIAKLSPLWL EIQAPVELAA TLKEGSTLKI ARSEVVGKLI
AIGRAVDAAS QTVLLRAEVG KGAEMLRPGQ VIEVEIAAPA GQQQRLPASA LARNEGTTVA
FVQTASDDKG TSFEVRPVRI ISQGGDSVTV DGIKADEKIA IKGISGLKAM LTGVGK
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