| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2781 |
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| Symbol | benD |
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| ID | 3566778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2983851 |
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| End bp | 2984627 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637681249 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_285981 |
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| Protein GI | 71908394 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 0.353662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAATC GATTCAAGAA CAAAGTTGCC GTCATCACCG GCGCCGCCCA AGGCATCGGC
AAACGCGTCG CCGAACGCAT GGCCGCGGAA AAAGGCATCC TGGTGCTCGT CGACCGGGCC
GAGATCGTCC ACGACGTCGC CAAATCGCTC AGCGCCAAGA ACGAGGTGAT CAGCCTGACC
GCCGACCTCG AGAAATTTTC CGAATGCGAG CGCGTCATGG CCGCCGCCGT CGAGCGTTTC
GGCCGCATCG ACATCCTGAT CAACAACGTC GGCGGCACGA TCTGGACCAA GCCTTACGAG
CACTACGCCG AAAACGAAAT CGAGGCCGAG GTGCGCCGTT CCCTGTTCCC GACGCTCTGG
TGCTGCCGGG CCGCCCTGCC CTACATGCTC GAAAAGGGCA AAGGATCCAT CGTCAACGTC
TCGTCGATCG CCACCCGTGG GGTCAATCGC GTGCCCTACG GCGCCGCCAA GGGCGGGGTC
AATGCGCTGA CCGCCTGCCT GGCATTTGAA AACGGCGAAC GCGGTATTCG AGTGAACGCC
ACCGCGCCCG GCGCCACCGA AGCCCCGCCA CGCATCATCC CCCGCAATAC GGCCAAACAG
AGCGAGCAGG AGCAGGCCTG GTACAAGCAG ATCTACACCC AGTCCCTCGA TAGCAGCGTG
ATGAAGCGCT ATGGCACGCT CGACGAACAA GCCGATCCGA TTCTTTTCCT GGCCTCCGAC
GAATCCGCCT ACATGACCGG ATCAGTCTTG CCGGTCGGTG GCGGCGACCT CGGCTGA
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| Protein sequence | MNNRFKNKVA VITGAAQGIG KRVAERMAAE KGILVLVDRA EIVHDVAKSL SAKNEVISLT
ADLEKFSECE RVMAAAVERF GRIDILINNV GGTIWTKPYE HYAENEIEAE VRRSLFPTLW
CCRAALPYML EKGKGSIVNV SSIATRGVNR VPYGAAKGGV NALTACLAFE NGERGIRVNA
TAPGATEAPP RIIPRNTAKQ SEQEQAWYKQ IYTQSLDSSV MKRYGTLDEQ ADPILFLASD
ESAYMTGSVL PVGGGDLG
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