| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2778 |
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| Symbol | |
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| ID | 3566775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2980899 |
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| End bp | 2982239 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637681246 |
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| Product | ring hydroxylating dioxygenase, alpha subunit:Rieske (2Fe-2S) region |
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| Protein accession | YP_285978 |
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| Protein GI | 71908391 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | [TIGR03229] benzoate 1,2-dioxygenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 0.604479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCA AGGAATATCT GGATTCACTG ATCCAGAAAG ACAAAGAGAA GGGCCTGTTT
CGCTGCAAGC GCGAAATGTT CACCAGCCAG GAACTGTTCG ATCTGGAGAT GAAATACCTG
TTCGAAGGCA ACTGGATTTA CCTGGCGCAT GAAAGCCAGG TCGGCAAGAT CAACGATTAC
TACACGACCA AGATGGGTCG TCAGCCGGTG TTCATCACCC GCAACAAGGA CAACCAGCTC
AATTGCTTCA TCAACGCCTG TGCTCACCGC GGCGCCACGC TGGCCCGCTT CAAGCACGGC
AACAAGGGCA CTTACACCTG CCCGTTCCAC GGCTGGACCT TCAACAACTC CGGCAAGCTG
CTCAAGATCA AGGACCCGGA AGGCACGGGC TACCCGGCCA CCTTCAATTG CGACGGCTCG
CACGACCTGA AGAAGATTGC CCGCTTCGAG TCCTACAAGG GCTTCCTGTT CGGCAGCCTG
AATGCCGATG TCCTGCCGCT GGAAGAGTAT CTCGGCGAAT CGAAGAAAAT CATCGACATG
ATCGTCGACC AGTCGGCGGA TGGTCTGGAA GTACTGCGCG GCGCATCGAC CTATGTCTAC
GAAGGCAACT GGAAGCTGCA GGCCGAAAAC GGCGCCGACG GTTACCACGT AACCGCCACC
CACTGGAACT ATGCGGCCAC CCAGGCCCAG CGCAAGAGCC GTGACGCCGG CGATGACATC
AATGCCATGA GCGCCGGCGG CTGGGCCAAG AATGGCGGCG GTTCCTATTC CTTCGAGAAT
GGCCACCTGC TGCTGTGGAC GCGCTGGGAC AACCCGGAAG ACCGTCCGCT AATGGAACAG
CGCGACCGCC TGGTCGGCGA ATTCGGCGAA GCCAAGGCCG ACTGGATGAT CAAGAACTCG
CGCAACCTCT GCCTGTACCC GAACGTTTTC CTGATGGACC AGTTCAGCTC CCAGATCCGC
GTCTTCCGCC CGCTGGCGCC TGACCGCACC GAAGTCACCA TCTACTGCAT CGCCCCCAAG
GGTGAATCGC CGGAAGCCCG TGCCAAACGC ATCCGCCAGT ACGAGGACTT CTTCAACGCC
TCCGGCATGG CCACGCCGGA CGATCTGGAA GAGTTCCGCG CCTGCCAGGA AGGTTTCAAT
GGCGCTTATC TGGAATGGAA CGACATGTCG CGCGGCGCCG AGCACTGGGT CGAAGGCCCC
GATGCCGAAG CCGACAAGAT CGGACTGAAG CCCATCCTGT CCGGCGTCAA GACCGAAGAC
GAAGGCCTCT ACGTCGCCCA GCACACCTAC TGGCTGGAAC AGATGCACCG CGCCCACGCC
GCCGAAGAAG CAAAAGCATA A
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| Protein sequence | MITKEYLDSL IQKDKEKGLF RCKREMFTSQ ELFDLEMKYL FEGNWIYLAH ESQVGKINDY
YTTKMGRQPV FITRNKDNQL NCFINACAHR GATLARFKHG NKGTYTCPFH GWTFNNSGKL
LKIKDPEGTG YPATFNCDGS HDLKKIARFE SYKGFLFGSL NADVLPLEEY LGESKKIIDM
IVDQSADGLE VLRGASTYVY EGNWKLQAEN GADGYHVTAT HWNYAATQAQ RKSRDAGDDI
NAMSAGGWAK NGGGSYSFEN GHLLLWTRWD NPEDRPLMEQ RDRLVGEFGE AKADWMIKNS
RNLCLYPNVF LMDQFSSQIR VFRPLAPDRT EVTIYCIAPK GESPEARAKR IRQYEDFFNA
SGMATPDDLE EFRACQEGFN GAYLEWNDMS RGAEHWVEGP DAEADKIGLK PILSGVKTED
EGLYVAQHTY WLEQMHRAHA AEEAKA
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