Gene Daro_2768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2768 
Symbol 
ID3566765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2968212 
End bp2968925 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content64% 
IMG OID637681236 
ProductABC transporter related 
Protein accessionYP_285968 
Protein GI71908381 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.0458182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACA TGCTGCTCGA AGCCAAGGAG CTTCACACTT ACTACGGTGC CAGCCACATC 
CTGCACGGCA TCGATTTCAA CATCCGCCAG GGCGAGGGCA TCGCGCTGAT GGGCCGCAAC
GGCATGGGCA AATCGACGCT GATCAAGTCC ATGCTCGGCA TCGTCCGTCC CAAGCACGGC
CGCGTGCTCG TGCGCGGCGA CGACTTCAGC AAGGCGCCGA CCTATCGCAC CGCCCAGCGC
GGCATCGCCT ACGTGCCGGA AGGGCGGGGC ATCTTCCCCA ACCTGTCCGT TCGCGAGAAC
CTGCAGATGT CGGCCCGCTG CGGTGTCGAC GGCCAGCGCA ACTGGACCTT CGACCGCGTG
ATGGCCACCT TCCCGCGTCT CGGTGAGCGG ATCAACAATG GCGGCTGGCA ATTGTCCGGC
GGTGAGCAGC AGATGCTGAC CATCGGCCGC GCCCTGATGA CCAACCCGGA CCTGCTGATC
CTCGACGAGG CAACCGAAGG CCTGGCACCG CTGATCGCCA TGGAAATCTG GCGCATCGTC
AAGGAAATCC GCAAGACCGG CATCGCCACG GTGATCGTGG ACAAGAACCA CGGGGCGGTG
ACCTCGATCT GCGACCGGGC GATGATCCTG GTCAAGGGCG AAGTGGTCTT CGATGGCAGC
AGCGACGAGG TGCGGGCCGA TCCGGAATTG ATCCAGAAAC ACCTGGGCGT TTGA
 
Protein sequence
MSNMLLEAKE LHTYYGASHI LHGIDFNIRQ GEGIALMGRN GMGKSTLIKS MLGIVRPKHG 
RVLVRGDDFS KAPTYRTAQR GIAYVPEGRG IFPNLSVREN LQMSARCGVD GQRNWTFDRV
MATFPRLGER INNGGWQLSG GEQQMLTIGR ALMTNPDLLI LDEATEGLAP LIAMEIWRIV
KEIRKTGIAT VIVDKNHGAV TSICDRAMIL VKGEVVFDGS SDEVRADPEL IQKHLGV