Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2765 |
Symbol | |
ID | 3566762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2965456 |
End bp | 2966682 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637681233 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_285965 |
Protein GI | 71908378 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 0.094864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCG CCAACGCGGG CGGCGACTGC GGTTGTGGCG AGCAAGTGAA TGTCAAACGC AACGTTGTAT TCAAGGAAAA CCTCGTGAGG CCATCTCTTA GCCGTATTGT TCCTTTTCTG TTCCTGTTCC TGGCTTTGAC CAGCCGGTCA GGGTGGGTTG TCGCCGACCT GGGCATCGCG CACGTCGCTC CTTTGACCGG GCCAGTGGCC ATTGAAGCGA AGGAGTACAA CCTCGGCATC CGACTGGCAA TTGCCGCCGC CAATGCCTCG GGTGGCGTTA ATGGTCAAAA ACTTAGCCTG AAAACGGAAG ACGACGAATA TACCCCGGAG AAGACGGTGG CCGCCCTGAA CCGGGTCGGT GCCAGCGAGG TGCTTGCAGT CCTTTTGCCC ATCGGCTCGC CGTCGATGAG CCGGGTGCTG GATGACAGAA TTCTTGAGCA GAACAGGCTG CCCATGGTCG GTGTCATTCC CGGAGCCGAA CTGTTTCGAG CCAAGACCAA TCCCTACCTT TATCACGTCA GGGCCGGCGA TCATGAGCAA TACCGAAAGC TGGTCGAACA CGCCTTGACG CTGGGCCTGA AGCGCATTGC CGTGGTCTAT GCCGACATTC CCTTTGGCCG GGACGGCCTG GCAGCGGTCG ACAGCTTTTT GCGAGAAAGG CAGCAGCCAC TGGTTCTGGA AAAATCCATC CCCGTGAAAG GGGCGATCGA TTTTTCAAAC GTGCTGGGGG GATTGGAGAA AGTGAGCCCC GACGTTGTCA TCGTCATCAC GCCGGCCAAG CTGGCTGGCG AGTTCGTGCA GGCCTATCGC GGACGCGGAC TGCCAGGCAC GATTGCCATG CCTTCTTACG GCAATGCGCC AAGTATTTGC CAAATTGCTG GTGACGCCAA TGCCCGCGGC GTGGTCCTGG CGCAGGTATT TCCGAACATC CGGAATACCT CGCTGCCGAT TGTCCGGCAG TACCAGGATG CGTTGCGCTT GCACGGTGAG AAAGAGCAGA AGGCCAGCCT TTTTCAGCTT GAAGCATTTA TCGCGACCCG CGTGCTGATC GAGGGAATCC GGCGTGCCGG CAGCGATGTG ACACGAGAAA AGCTCATTGC AGCGCTAAAT GCCATGAGCA AATTTGATCT CGGCAGCTTT GTGGTGTCTT TTTCAGGCGC CAGGCACACA GGGTCAAATT TTGTCGAGAT CAGCATGATA GGCAGGGACT GCCAGTTGGT TTACTGA
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Protein sequence | MRIANAGGDC GCGEQVNVKR NVVFKENLVR PSLSRIVPFL FLFLALTSRS GWVVADLGIA HVAPLTGPVA IEAKEYNLGI RLAIAAANAS GGVNGQKLSL KTEDDEYTPE KTVAALNRVG ASEVLAVLLP IGSPSMSRVL DDRILEQNRL PMVGVIPGAE LFRAKTNPYL YHVRAGDHEQ YRKLVEHALT LGLKRIAVVY ADIPFGRDGL AAVDSFLRER QQPLVLEKSI PVKGAIDFSN VLGGLEKVSP DVVIVITPAK LAGEFVQAYR GRGLPGTIAM PSYGNAPSIC QIAGDANARG VVLAQVFPNI RNTSLPIVRQ YQDALRLHGE KEQKASLFQL EAFIATRVLI EGIRRAGSDV TREKLIAALN AMSKFDLGSF VVSFSGARHT GSNFVEISMI GRDCQLVY
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