| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2684 |
|---|
| Symbol | |
|---|
| ID | 3567026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2880383 |
|---|
| End bp | 2881048 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637681150 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_285884 |
|---|
| Protein GI | 71908297 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 0.370513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00176355 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAATACGA AATTATCGAA GCTGATCGCA GGGATAGCGT TTCTATTTCT AGGAACCGCA
AACGCCTTGG CTGCCCCTGT CTATGAGAGC GCCGACTTTG GTGGTGGGTT ATTTAGTGTC
ACATCCTCTT TTGTCAGCAG ACTAAATGCT GCAGGTATTA GTGGATTTAG TTCTACATCC
TGTTACACCT GCGCTACTCC TGCACTCGTT TCTGGCCATT TCATCTTTGA TAGTTCGGTA
CCTGTTCCTA GCTCAGGTTT CGCAAATGTT TTTTCTATCG GTGCAATTCC GACCGTAGCA
AACAGCGCCA TTTTTGAATT GAATATTGGC AGCCTGACAT TCCGCTTCGG CGACCCAGGC
ATTCAAGGCG GCCCCGCCAT TCAATACAAC AATGGTGTTT ATAACGGCAT TTTCTTTGAC
GAAACATTCG ACTCCCCAAA CAGCACGCCT CTAGAGCTAA GCGTCCAAGG CGGGAGTTTC
TCGCTGAGGA ATCAATCCTT CCAAAACCTC TTAACAGGTT TCATCACTGT TGGCGCAAAC
GGCATGACCA ACGTTCAACC ATTCACCCCT GGAGGGGGTC AGAACAACGT GCCTGAGCCG
ACATCTATTG CTTTGGTTGG ACTTGCCTTA GCTGCTTTCG GTTACGCTCG CCTAAAGAAA
AGTTGA
|
|---|
| Protein sequence | MNTKLSKLIA GIAFLFLGTA NALAAPVYES ADFGGGLFSV TSSFVSRLNA AGISGFSSTS
CYTCATPALV SGHFIFDSSV PVPSSGFANV FSIGAIPTVA NSAIFELNIG SLTFRFGDPG
IQGGPAIQYN NGVYNGIFFD ETFDSPNSTP LELSVQGGSF SLRNQSFQNL LTGFITVGAN
GMTNVQPFTP GGGQNNVPEP TSIALVGLAL AAFGYARLKK S
|
|---|
| |