| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2683 |
|---|
| Symbol | |
|---|
| ID | 3567025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2879678 |
|---|
| End bp | 2880061 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637681149 |
|---|
| Product | hemerythrin HHE cation binding region |
|---|
| Protein accession | YP_285883 |
|---|
| Protein GI | 71908296 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 0.231779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00433407 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA ACTTGCTACT TGGCGTACCA AATATCGACC ATCAGCATCG AGAGCTATTC
CGATCCTTCC AGCACCTGCT ATCGATCAAC TCTGGTGATG AATCATTTTC CGAGGCGCTT
TCCCGCCTGA CGATCCAGAT TCATCAGCAC TTCAAGACTG AAGAGCACTA CATGGCTGGG
CTTCATATGC CGGCCGCTGA GTTGGCTGAA CATGTACTAG CACACACGCA GATCATTGAA
GACCTGACAG AGATTCATTT CGAGACGATG CATGGCCTTG GGGTGCCGTT CGAAGAGATC
ATCAAGCGTG TGGCGTCCTA TGTGAATCAT CATGTCGTTG AGTTTGATCT TCAGCTGAAG
CCGTACATTG GACATCGGGC ATAA
|
|---|
| Protein sequence | MNKNLLLGVP NIDHQHRELF RSFQHLLSIN SGDESFSEAL SRLTIQIHQH FKTEEHYMAG
LHMPAAELAE HVLAHTQIIE DLTEIHFETM HGLGVPFEEI IKRVASYVNH HVVEFDLQLK
PYIGHRA
|
|---|
| |