Gene Daro_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2672 
SymbolpheT 
ID3567108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2867980 
End bp2870364 
Gene Length2385 bp 
Protein Length794 aa 
Translation table11 
GC content58% 
IMG OID637681137 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_285872 
Protein GI71908285 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT CCGAATCCTG GCTGCGTACC CTCGTCGATC CCAAATTGTC GAGCGAGGAA 
CTCTCCCATC TGTTGACTAT GGCCGGCCTC GAGGTCGAGG AGCTTGACCC GGTCGCTCCG
GCTTTTGATA ATGTCGTTGT TGCCCACGTG CTGGACGTGG TCAAGCACCC TGATGCTGAT
CGTCTGAACG TCTGCCAGGT TGATACTGGC AGTGGAGCAC CGACGACCAT CGTCTGCGGT
GCGCCGAATG TTGCCGTTGG TCTCAAGGTG CCGTGCGCGC TGCCAGGTGC GAAGCTGCCT
GGCGATTTCA CCATCAAGAT TGCCAAGGTG CGCGGCATTG AATCCTCTGG CATGCTGTGC
TCCGCCAAGG AACTGGGCAT TGCCGAAGAG GCCTCGGGTC TGCTTGTTCT GCCGTCCGAT
GCGCCAGTCG GCCAGGCTAT CCGACAGTAT CTCGATCTCG ACGACAACCT GTTCGAACTG
AAGCTGACGC CGAACCGTGC CGACTGTCTG TCGCTGCTCG GCATTGCCCG CGAAGTCGGT
GCCATTACCG GTGCCGCGAC CAGCCTGCCG GTCGTGCCGG AAGTGGTGGC CAGTATTGCA
GATAGTCGCG CCGTCGTGCT CGACGCGCCG GAAGCCTGTC CGTTGTACTG CGGCCGCGTC
CTCAAGGGCG TCAATGCCAA GGCGCCGACG CCGGAGTGGA TGAAGCGCCG CCTCGAACGT
AGCGGCATTC GAGCCATTTC AGCGCTGGTC GACGTCACCA ATTACGTGAT GCTCGAACTT
GGGCAACCAT TGCATGCTTT CGATAACACC AGGCTGGAAG GCGCTGTGCA TGCTCGCCTG
GCGAAGCCGG AAGAAAAACT GCTGCTGTTG AACGAGCAGA CTATTGCGGT TGATGCCGAT
GTCCTGGTGA TCGCCGATGA CGTGAAGCCC TTGGCCATGG CTGGCATCAT GGGTGGCGAG
GAAAGTGGCA TTACGCTGGA AACCAGCGAA CTCTTCCTGG AGTCAGCCTT CTTCGCGCCC
AAGGCCATTG CCGGCCGGGC TCGTCGCTAT GGCTTCGGCT CCGATGCCTC GCATCGCTTC
GAGCGCGGAG TCGATTTTGG CGGCGCGCGG CGGGCTATCG AGCGCGCCAC GCAATTGATT
CTCGAAATCT GCGGCGGCCA GGCTGGCCCG GTCGTTGAGG CCAAGGCTGT TTTGCCGGTC
CGCAAGCCGG TTCTCCTGCG TACCGCTCGT GCCGAAATGG TGCTTGGTCT GCCGCTCGGT
GCCGAACGCA TTGCCGGTCT GTTTGCCGGT CTTGATCTCT CTTTTGTGTG CGAAGGCGAT
AATTTCCAGG TGACGCCGCC ATCCTGGCGC TTTGACATGG AAGTCGAAGA AGATCTGATC
GAGGAAATTG CACGCCTGTA CGGCTACGAC AACATTCCGT CAGTTTCGCC ACGCGGTGCG
CTGAAAATGC AGGTCCAGCC GGAAGCGCGA CGGCCGGCCT ATCGGCTTCG CCAGATGCTG
GCCGACCGTG GTTATCAGGA GGTTGTTAAT TTCGCCTTCG TCGAGGCAGC ATGGGAGGCC
GATTTTGCCG AAAATGTGGC AGAAGCCGAG CTGATTCGCC TAGCCAATCC GATTGCCAGC
CAGATGGCGG TGATGCGCTC GACACTGTTC GGTGGTCTGA TTTCGAACCT GATTACCAAC
CTGAAACGTA AGCAGACCCG TGTCCGCTTG TTCGAAGTCG GTCGTACCTT TCATCGTGCA
GCCGATGCTG TGCCGGTCAA TGGCTTTCAT CAGCCATGGA AACTGGCAGG ACTGGCTTTC
GGCGGCGCCT TGCCGGAAGG TTGGGGTAGC GGGGCGCGTA AGGTAGATTT CTACGACGTC
AAAGGTGATA TTGAAGCGCT TCTGGCACCG GCTGTTTTGC GTTTCGAAAA GCTGGCGCAT
CCGGCGCTGC ATCCAGGGCG TGCTGCCCGC ATTCTGTTCG ACGGTCGCGA CATTGGTTGT
ATCGGTGAAG TGCATCCGGA GTGGGTCCAG AAGTACGATC TGCCGCAGGC GCCCGTGGTT
TTCGAACTGG ATTTTGACGC GGTCAAGGCT GCAAATGTTC CGGCCTATGC CGAGGTCTCC
AAGTTCCCGC CGGTGATTCG CGACCTGGCT ATTGTAGTCG ATCAAAATGT GGTTTTGCAG
ACCTTGCTCG ATGGACTCAA AGGGCAGGTT TCTGACCTCA TTCAGGACAT TCAGTTGTTC
GATGTTTACG TCGGAAAGGG TGTCCCGGAA AACAAGAAAA GTCTTGCTTT CCGGATAGTT
ATGCAAGATA CTCAACGCAC TTTGCAAGAT TCAGAAGTTG ATGCTGCAAT GCAGCAACTG
GTGTCCTGTT TCGAACAGGC ATTCGGTGCT CAACTGCGTG CCTGA
 
Protein sequence
MKFSESWLRT LVDPKLSSEE LSHLLTMAGL EVEELDPVAP AFDNVVVAHV LDVVKHPDAD 
RLNVCQVDTG SGAPTTIVCG APNVAVGLKV PCALPGAKLP GDFTIKIAKV RGIESSGMLC
SAKELGIAEE ASGLLVLPSD APVGQAIRQY LDLDDNLFEL KLTPNRADCL SLLGIAREVG
AITGAATSLP VVPEVVASIA DSRAVVLDAP EACPLYCGRV LKGVNAKAPT PEWMKRRLER
SGIRAISALV DVTNYVMLEL GQPLHAFDNT RLEGAVHARL AKPEEKLLLL NEQTIAVDAD
VLVIADDVKP LAMAGIMGGE ESGITLETSE LFLESAFFAP KAIAGRARRY GFGSDASHRF
ERGVDFGGAR RAIERATQLI LEICGGQAGP VVEAKAVLPV RKPVLLRTAR AEMVLGLPLG
AERIAGLFAG LDLSFVCEGD NFQVTPPSWR FDMEVEEDLI EEIARLYGYD NIPSVSPRGA
LKMQVQPEAR RPAYRLRQML ADRGYQEVVN FAFVEAAWEA DFAENVAEAE LIRLANPIAS
QMAVMRSTLF GGLISNLITN LKRKQTRVRL FEVGRTFHRA ADAVPVNGFH QPWKLAGLAF
GGALPEGWGS GARKVDFYDV KGDIEALLAP AVLRFEKLAH PALHPGRAAR ILFDGRDIGC
IGEVHPEWVQ KYDLPQAPVV FELDFDAVKA ANVPAYAEVS KFPPVIRDLA IVVDQNVVLQ
TLLDGLKGQV SDLIQDIQLF DVYVGKGVPE NKKSLAFRIV MQDTQRTLQD SEVDAAMQQL
VSCFEQAFGA QLRA