| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2667 |
|---|
| Symbol | |
|---|
| ID | 3567102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2863412 |
|---|
| End bp | 2865448 |
|---|
| Gene Length | 2037 bp |
|---|
| Protein Length | 678 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637681131 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_285867 |
|---|
| Protein GI | 71908280 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTC GAGGCATTAA GCTCAGAGCC GTAACTGAGA ATGGAGATTT CGGATTCGAT
TTCAGGTTTG CCAGAAACCT GACCATCATT CGTGCAAAGA ACTCTAGTGG CAAGAGCACG
TTGTTTAACA GTTTGCTATA CGGGCTCGGT ATGGAGGAAC TTGTCGGCGG AAAAGGTGAG
CGCATTCTTC CATACGCAGT GAAGGATTAT TTTGAATATG ATGGCCAAAG AGTCTTGGTA
ACGGCCTCTG AAGTCATTCT TGAGATTGAA AATAAGTCAG GTCGGGTGAT TACACTTCGA
CGTGCCATTC GAGACACAGT CAAAGACTCC AAGCTCATCG AGGTATTCGA ATGTGCTCAT
TTAACAGCAG GAGATGAGCT TGTTAATGCC TCTCCGACAT ATGTGCACGA CGCCGGTGGC
GCTCAGAAAA ATGAAGGATT TCATCGCTTC CTCGAGTCTT TCTTAGAGCT AAGCTTGCCG
CGAGTCGCCA CAACTAGTGG TGGTGAGGCA AAACTTTATC TTCAGACGAT TTTCGCAGCT
CTGGCCGTCG AGCAAAAGCG CGGGTGGACT GACTATATTG CCAACATTCC CTTCTACGGC
ATTCGCGATG CGCGAGCTCG GGTAGTCGAT TTTCTACTTG GATTGGGGGT CTTTGAAACC
AACGCCGCCA GAAATAGGCT TAATTCTGAG TCCGTTGAAA TCGACAATGA TTGGCGCCGC
ACGCTAGGTG AGTTTCAGCG CGAGGCAAGT TCACTTGGGG TTGTGATTGA AGGTGTGCCT
GCTGGCCCTT CAGCACTATT TACTCAGAAC TCCGGGAGTA TTCAGCGTTT ATACGAGGGC
GCCACAGTTC CTCTGGGTGA TTACATATCC CAGCTCAGGA GCGAGTACTC CGCATTGACT
GCAAGAAGTG AGCAGTTTAG CCGGGTTACT GGCGAAGATG CACTAAAGGA GATGGCAGCG
GTTACAGCCG AGCTACAACA CCTGAGTGTT GTCCATGAAC GAGCCACGAC GTCGCTAGGC
GACCTAAAGG CATCCCTCAT GGAATATGAG ACTCTTTTAA GAGAGGCATC TGAGGATTTG
GACCGCAATA AGACGGCGGC AAAGCTTAGA GACCTGGGGG CGAAATACGA CATTGAGCTA
TCTTCTGGCC GCTGTCCCAC TTGCCATCAG GTGGTTGAAG ATACATTGCT CGTCGGAGCA
GTAACCGGGC CGCAGATGGA CTTAGCTGCC AATATTGCTT ACCTGGATAG TCAGTGCCGG
ATGTTGCGTC GTCAAGTTTC TGGGGTCCGG GAAAGCATTC GTGCAACGGA AACGAGGAGC
GCTGAACTCG CGGCTCGACT AGCGGCCAAG CGCGACCAGT TGGTTGCTAT GCGTGGAGAT
GTTAGCTCCG GCGCTAGTGA GTCCAAGGCT ATCGTAAGGC GTCAGGTCCA GATTGAAGTT
GAGGTAGAGG CGCTTGAACG CCTGGCTGCT CAATCCACAG ATGTCTTTGG CCGTTTGTTT
TCAGTTGCTC AGCGGCTAAA GAATAATCAA GCTGCTCGAG CATTGCTTCC CAAGAACGCA
TACACCTCTG ATGACGAGAC TCGCATCTCT GTGTTTCAGA AACAATTCAG GGCCAATGCA
GGTTCTTTCG GTTACGAAAG TGCCAGAATT CAGGATATTG AAATCAGTAG GGATGCACTT
GTTCCATGCT TGGCTCAGCT CGAATTGCGC GAAATTAGGA CTGACATTAA GTCGGATTCC
AGTGCCAGTG ATTTTGTACG ACTCATTTGG AGTTATCTCC TCGCATTGCA TCAGACCTCT
GTGTTTCCCA CTACACCAGG CCATCACCCT AATTTCTTGA TGCTTGACGA GCCTGGTCAA
CATTCGATGG CCGTTGATAG CCAGCACGCT CTGCTCAAGC AGTTGGCTAG CGAAATAAAG
CTTCAGAGCA TAGTGGCTGC ATCATTCGAT GAGACTGAGG AGGTGTTCCT TCAGGCAACT
GCAGGGATCG ACTTCAGGCT GATTGAGTGG AGCGGAAAGC TTTTGCGACC GCTCTAA
|
|---|
| Protein sequence | MIIRGIKLRA VTENGDFGFD FRFARNLTII RAKNSSGKST LFNSLLYGLG MEELVGGKGE
RILPYAVKDY FEYDGQRVLV TASEVILEIE NKSGRVITLR RAIRDTVKDS KLIEVFECAH
LTAGDELVNA SPTYVHDAGG AQKNEGFHRF LESFLELSLP RVATTSGGEA KLYLQTIFAA
LAVEQKRGWT DYIANIPFYG IRDARARVVD FLLGLGVFET NAARNRLNSE SVEIDNDWRR
TLGEFQREAS SLGVVIEGVP AGPSALFTQN SGSIQRLYEG ATVPLGDYIS QLRSEYSALT
ARSEQFSRVT GEDALKEMAA VTAELQHLSV VHERATTSLG DLKASLMEYE TLLREASEDL
DRNKTAAKLR DLGAKYDIEL SSGRCPTCHQ VVEDTLLVGA VTGPQMDLAA NIAYLDSQCR
MLRRQVSGVR ESIRATETRS AELAARLAAK RDQLVAMRGD VSSGASESKA IVRRQVQIEV
EVEALERLAA QSTDVFGRLF SVAQRLKNNQ AARALLPKNA YTSDDETRIS VFQKQFRANA
GSFGYESARI QDIEISRDAL VPCLAQLELR EIRTDIKSDS SASDFVRLIW SYLLALHQTS
VFPTTPGHHP NFLMLDEPGQ HSMAVDSQHA LLKQLASEIK LQSIVAASFD ETEEVFLQAT
AGIDFRLIEW SGKLLRPL
|
|---|
| |