Gene Daro_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2652 
Symbol 
ID3567144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2846678 
End bp2847259 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content64% 
IMG OID637681116 
Producthypothetical protein 
Protein accessionYP_285852 
Protein GI71908265 
COG category 
COG ID 
TIGRFAM ID[TIGR02747] type IV conjugative transfer system lipoprotein TraV 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value0.584434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC TGATCTTGCA ACTCGGTGCC GCCTGCCTAC TGCTCCCCTT GGGCGCCTGC 
ATGAACATGT CCGGCCTGGG CGGCGACTCG AAGTACGCCT GCAAGGCCCC CGATGGCGTT
GCCTGCGACT CGGTGTCCGG CACCTACGCC AACGCCCTTC ACAACAATCT ACCCAGCCAG
CAGGCCCAAC GCTCCGCTCG CCGGCAGAAA GAGACATCTG AAGAGAACGC CTCCCCCACG
GCTGGACGTC CTATTTCCTT GGCAACAGCC AACCTTTCCG GGATGGCCAT AACGCCCAGT
CCCTTGCGCA CCCAGGCCCG CATCCTGCGG CTGTGGATCA AACCCTGGGA AGACGCAGAC
GGCGATCTCT ACGATCAGGG CTACGTCTAT GTCCAGGTGG ACAACGGCCA GTGGCAGATC
GACCACGTGC AACACCAGAT CCGTGATCGC TATGCACCGC TGAAGCTGCC ACCCAAGCCG
GCCGCTGAGA CGACCACCGA ACTCGGCGCC AGTACGTCGT CGCCCCTACC GATGTTGCAA
CGCCCACCGC TGTCCGGGGC CGGCGCCAAC CCTGCGCAGT GA
 
Protein sequence
MKTLILQLGA ACLLLPLGAC MNMSGLGGDS KYACKAPDGV ACDSVSGTYA NALHNNLPSQ 
QAQRSARRQK ETSEENASPT AGRPISLATA NLSGMAITPS PLRTQARILR LWIKPWEDAD
GDLYDQGYVY VQVDNGQWQI DHVQHQIRDR YAPLKLPPKP AAETTTELGA STSSPLPMLQ
RPPLSGAGAN PAQ