Gene Daro_2650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2650 
Symbol 
ID3567142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2844503 
End bp2845876 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content66% 
IMG OID637681114 
ProductTraB pilus assembly 
Protein accessionYP_285850 
Protein GI71908263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value0.835433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CACGTCAGTG GATGCACACG CTGCGGGGCT TACCGCAGCA ATTGCTACAG 
CACCTCTCCC CGCGGCAACG CCAGTACGCC ATGCTCGGCG CGTTGCTGGC CGGCGGCGTC
GGGCTGCTCT GGTCGATTTT CGCATTCACG GCAAGCAGTC CGCCGACGAG CAGCACGCAA
CCCGCCGCCG GGCCGGCCAG TTCGGTCACC AACATTGGCG TGATGTCACC CGGCGCTCAG
GTCAATCCGG TCGACCAATG GGTCGGCACG GCCGGGCGCA AGCTTGCCCA GTACGAGAAC
GAACGCGAAG AACAGGGACG ACTCAACAAG GATCGCCAGA CCTTCGAAGC GAAAACGATG
CAGCGCTTTG CCGAACTGGA ACAGCGACTG ACTTCGACCC AGCAGGCGGC CTCTACGCCC
CCGCCACCCA CGCCAGTCCC GACCATGCCG CCGGCGGCGA GCCTGCCCCC TGCTCCACCG
CCTTCCAAGG GCTTGTCCGC CGGAGCAATG CCAAGCGGCA TGCCCGGCGA ACTGCTGCCT
CCGAGCCCCC TTATTGCACC AACGCCAGCG ATTACCCGGA TTAGCGTTGC CGAGCGCTCC
CTGCTCGCCA GCACGGGAGA GAAAGCAGAG CGCGCCGCAG GGGCCGGATC GCAAGCATCC
ACCCGGACCG TCGCCACCTT CCTGCCCGTC AGTTTCACCC GTGGCACGCT GCTGGGTGGC
CTGGATGCGC CGACCGGCGG TCAATCGCAA TCCAATCCGC ACCCAGTCCT GATCCGTCTT
TCAGACAACT CGTTCCTGCC CAACCGCTTC CGCGCCGAAT ACCGGGAGTG CTTTGTGGTG
GCCGCCGGCT ATGGCGACAT CAGTTCCGAG CGTGCTTACC TGCGCACCGA GAGTCTGTCT
TGCGTACGAA CCGACGGCGC GACGCTGGAA GTCAAGATTC AGGGCTCGAT CTACGGCGAG
GATGGCAAGG TCGGCATGCG CGGGCGGCTG GTCACCAAGC AGGGCCAGAT GCTCGCCAAC
GCCCTGCTGG CCGGCGTGGT CAGCGGTATC GGCCAAGGCC TGGCGACCTC GTCGACCGAG
TACAGCACCT CGGCCCTCGG CACAGTCGCC AGCGCCACCG GTTCCGAAGC CTATCGCGCC
GGCCTCGGCT CCGGTGTCGG CAAGGCCCTC GACCGGCTGG CCCAGTACTA CATCAAGCTC
GCCGAGAACA CCTTCCCGGT CATCGAAGTG GACGCCGGCC GCGAGGTCGA CGTTGTGATC
ACCAAGGGCG TGCGCATCGA TGTGCCGATG ACAAGCGGCG AACCGTCTTC CGCCCGCTTC
GCCAATTCCC CTGAAACTCG TTACCTGGAG ACCTCGGACG ATGGCAACTA CTAA
 
Protein sequence
MTTPRQWMHT LRGLPQQLLQ HLSPRQRQYA MLGALLAGGV GLLWSIFAFT ASSPPTSSTQ 
PAAGPASSVT NIGVMSPGAQ VNPVDQWVGT AGRKLAQYEN EREEQGRLNK DRQTFEAKTM
QRFAELEQRL TSTQQAASTP PPPTPVPTMP PAASLPPAPP PSKGLSAGAM PSGMPGELLP
PSPLIAPTPA ITRISVAERS LLASTGEKAE RAAGAGSQAS TRTVATFLPV SFTRGTLLGG
LDAPTGGQSQ SNPHPVLIRL SDNSFLPNRF RAEYRECFVV AAGYGDISSE RAYLRTESLS
CVRTDGATLE VKIQGSIYGE DGKVGMRGRL VTKQGQMLAN ALLAGVVSGI GQGLATSSTE
YSTSALGTVA SATGSEAYRA GLGSGVGKAL DRLAQYYIKL AENTFPVIEV DAGREVDVVI
TKGVRIDVPM TSGEPSSARF ANSPETRYLE TSDDGNY