Gene Daro_2644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2644 
Symbol 
ID3567136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2841019 
End bp2841567 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID637681108 
Productlytic transglycosylase, catalytic 
Protein accessionYP_285844 
Protein GI71908257 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGC TGGCTGTTGC CCCATTTGCT GCCCTTGCCA TTCTGGCAAC CAAGCCCACC 
TGGGCCCTAG CCTGCTGGGA AGAAGCAGCT CAACGCTACG GCATATCAGC CGAGTTGCTC
TACGCCATCG CCCGTGTCGA ATCGAACCTG AATCCGAACG CGGTCAACCG CACGCATATA
CAGCGCACCG GCTCCTACGA TATCGGACTC ATGCAGATCA ACAGTGGCCA TCTTTCAACC
CTGTCACGCC ACGGCATCAA GGAAGCAGAT CTCTTCGTAC CATGCACCAA CATTCAGGTC
GGTGCCTGGT TGTTGTCCGA CCTGTTCTCC CGGCAGGGCG CGACCTGGGA TACGGTCGGT
GCCTACAATG CCGCCTGCTC ACAACTCAAG GGTGAAGCCT GCTCCAAAGC CCGCGCCCAA
TACGCCTGGC GGGTGTATCG CCAGTTGCCC GCGCAACATG GCAGCCAACT CTCCGGGGAA
ATAAAGAGGG GCAAACAGAC GCCCCGAGGC GAAACATTCG CCCTGATGTC GGTAAGGGTG
GCGCCATGA
 
Protein sequence
MRLLAVAPFA ALAILATKPT WALACWEEAA QRYGISAELL YAIARVESNL NPNAVNRTHI 
QRTGSYDIGL MQINSGHLST LSRHGIKEAD LFVPCTNIQV GAWLLSDLFS RQGATWDTVG
AYNAACSQLK GEACSKARAQ YAWRVYRQLP AQHGSQLSGE IKRGKQTPRG ETFALMSVRV
AP