Gene Daro_2634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2634 
Symbol 
ID3567264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2834071 
End bp2834628 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID637681098 
Productsigma-70 region 2 
Protein accessionYP_285834 
Protein GI71908247 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02959] RNA polymerase sigma factor, SigZ family 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value0.389138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.692969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGC CCTGCCTGCT CACTGCCTGG GCGGCCCATG AGGCTGAATT GCGCGGCTTT 
TTGCGCCACC GCTCCGGTTT GCTCGAAGAA GCTGATGACC TGTTGCAGGA AGTCTTCATC
CGGGCACTGC GTCAGGACAC GCAGTTCTGC ATCATCGAAA ACCCCAGGGC ATGGCTCTAC
CAGGTCGCCC GCAATATTCT GGCCGATCGG TTCCGACATG CCCACGAGCA TGTGCCGCTG
CCCGATGACG TTCCCGAGGT GTTGCTCGAT GAAGCACCCA CGGTCGACGC TTTGAGCCAA
TGCCTGCCGA GGGTGCTCAC CGAACTGTCG GCTGATGACC GACTGGCGAT CACTTTCTGC
GACATCGAAG GAAATTCGCA GCAGGCCCTG GCTGAACATC TCGGCATTTC CCTGCCGGGA
GCAAAATCCA GAATCCAGCG GGCCCGGCAG CGATTGCGTG AGCAGTTGGT CTGTGCCTGC
CAGGTCACCT TCGACGACAA CGGGGATGTC TGCTGCTTCG TTCCACGGCC ACCGCTAACG
GACTCGCCGG ACAAGTAA
 
Protein sequence
MGVPCLLTAW AAHEAELRGF LRHRSGLLEE ADDLLQEVFI RALRQDTQFC IIENPRAWLY 
QVARNILADR FRHAHEHVPL PDDVPEVLLD EAPTVDALSQ CLPRVLTELS ADDRLAITFC
DIEGNSQQAL AEHLGISLPG AKSRIQRARQ RLREQLVCAC QVTFDDNGDV CCFVPRPPLT
DSPDK