| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2627 |
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| Symbol | |
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| ID | 3567257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2826963 |
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| End bp | 2828162 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637681091 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_285827 |
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| Protein GI | 71908240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 80 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.524182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCC GTACCCTGAC CGCCGCCGCC CTGGTGCTTT TGCTGACGCT GGCCGCCTGC
GGCCGCAATG CCCCCGAGGC CAAGCCGGCA ACCGAAAGCC AAACCGTCGC CCCGGAAAAG
ACCGCTGCCA ACGACAAGGA AGCAGCCAGC GAAGCGCCGG AAGCCGGTCA AATCCATCTG
ACCGAGGCGG ACATCAAGGC GGCCGGCATC CGCACCGAGG AAGCCAACGA AGCCGAAGTC
CATGAGCGCA TCGCCGTCAC GGCCACCATT CAGGCCAACC AGGACCGGCT GGCGCATGTC
GTCCCACGGG TGCCGGGCCG CCTCGTCGGC ATCACGGCCA AACTGGGCGA CCGGGTCAAG
GCCGGGCAGA CCCTGGCCAG CCTGGACAGT ATCGAGATCG GTGAAGCTCA TTCCGCTTAT
CTTCAGGCCG ACAGCCAGTT CCGGCTGGCC CAAGCCGATT TCGAGCGCGC CGAAAAGCTC
CATGCGGAGC AGATCGTGCC GGAAAAGGAC TATCTGCGCA GCCGTTCTGA ACTGGAAAAA
GCCCGCGCCA ACCTGCGGGC GGCCACCGAC AAGCTGCGTC TGATGGGTGT GCCGCCGGCC
CGCTCGGAAT CGGCCGTCTC GGTCTTCCCG GTTAGCGCGC CCTTTGCCGG CACGGTGATC
GAGAAGACGG CGGTGCTGGG TGAGCTTGCC CAGCCGGACA AGTCCCTGTT CACCGTGGCC
GATCTGTCTG TCGTCTGGAT CGAGGCCAAT CTGTTCGAGA AAGACCTCGG CAAGATCAAG
GTCGGCGCCA CGGTCGGCGT ATCGGTTGCC GCCTATCCCG ACGAGTTGTT CAAGGGGCGC
CTGACCTACA TCAGCAGCGT CATGGATAAG GAAAGCCGGA CGATCAAGGC TCGCGTCGAA
GTTGCCAATG CCGACGGCCG CCTGAAGCCC GACATGTTCG CCAACGCCGC CATCGACACC
GCCACGGCGG GCAAGGCGCT GACCGTGCCG ACGAGCGCCG TGCTCCTGCT GGAGGGAAAG
AAGACCGTCT TCGTTCGTGA GAAGGAAGGG TTCGAGAAAC GGGAAGTCGA GTTGGGCGAC
AACCTCGGTG GCCGTTTCGT GGTCAAGGAA GGCATCGAGG CCGGTGAGGC GGTCGTGGTC
GAAGGCGCCT ATGCGCTCAA GGCGCGGCTG CTGAAATCCA AAATCGGCGA TCACGACTAA
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| Protein sequence | MMTRTLTAAA LVLLLTLAAC GRNAPEAKPA TESQTVAPEK TAANDKEAAS EAPEAGQIHL
TEADIKAAGI RTEEANEAEV HERIAVTATI QANQDRLAHV VPRVPGRLVG ITAKLGDRVK
AGQTLASLDS IEIGEAHSAY LQADSQFRLA QADFERAEKL HAEQIVPEKD YLRSRSELEK
ARANLRAATD KLRLMGVPPA RSESAVSVFP VSAPFAGTVI EKTAVLGELA QPDKSLFTVA
DLSVVWIEAN LFEKDLGKIK VGATVGVSVA AYPDELFKGR LTYISSVMDK ESRTIKARVE
VANADGRLKP DMFANAAIDT ATAGKALTVP TSAVLLLEGK KTVFVREKEG FEKREVELGD
NLGGRFVVKE GIEAGEAVVV EGAYALKARL LKSKIGDHD
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