| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2587 |
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| Symbol | |
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| ID | 3567427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2787923 |
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| End bp | 2789938 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637681052 |
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| Product | PAS |
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| Protein accession | YP_285788 |
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| Protein GI | 71908201 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.187407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.694957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAG ATCGGCCCGC CCTGCAAATT GCCGGAATAT ATGCCCTGAT TGGAATCAGT
TGGACTATCT TTTCAGATCA AGTCCTTCTC GCAATGACTC CGGATTTGCT TGTTTTCTCG
TGGATAGGCA CTTGGAAAGG TGTTGCGTTT ATTTTTGCCA CCGCGTGCAC TATTTATTTG
ATTTCAAAGC CACGAGTGCG TATTGAAAAT CGAGCCTCAT GGAATGGCAT CAGTGAGCCA
GGAACAGGCT CGCTAGTTCT TGTTTTTGCG GTCTTGGCCG GAGTAATTTT GCTCGCGGGT
TTTGTGCTAG TGGCTCAAAT GACTGCGAAA CAAAGGAATA GTGAGATTGA ACGTCTGCAA
GCTATTGCCG ATCTCAAGGT CGGTCAAATT TTAGCTTGGC TTACGGAACG TGATGCGGAT
GCCAAAATGA TTCTCAGCGA CGATTCTCTG GTCAATTTGT ATCTGGATTG GAGACAGTCC
GAGTCAACTT TAGCCCGACG CCGTCTTATA GAGCGACTCC ACTCTTATAA GACATCTAAA
GATTATATTG AGGTTGTTTT GCTCGGGATC GATGGTGATC AATACTCGAC TAGTGCAAAT
TCTGAAATAT TGACCAAACT TCCTGCTGTG CAGGCAGCAG TGAAAGAAGC ACACACAACA
GGACAGTTGT TGAATACGGA TATCTATCGA GACGAAGAAG GAAAACTGGG GCGAGTGCAT
CTGGATTTCG TGGTGCCGTT ACGCTCGGGG AGCATTAAAC AAGAACTGAC GGTGGTGATA
CGTACCGACC CCAATCGGTT TTTATTTCCA TTTATCCAGT CCTGGCCCAT ACCAAGTGCG
AGTGCTGAAA CGCTGTTATT TCGCCGTGAG GGTAACAACG TTTTGTTTCT GAATGAGTTG
CGACACCGTT CGGATACATC TGTGCGCTTG CAGGTTCCCG TGGATGAAAA AAATTTGCTG
GCATCTCAAG TTCTTCGCGG AGATGCACTT CCAGATCAGG CAGTTGAAGG TATGGACTAC
CGAGACATTC CTGTATTGGG CGTTGTGAAA GCCATTCCCG GAACCCCTTG GTTTCTCGTT
GCAAAACTCG ATAAAGGCGA ACTCTATGCC GGGGCAAAGC GCGATGCCGG CTGGATTGCC
TTGGCTGACA TCCTGGCATT GATCGTAGCC GCAGTAGCCA CTATTTTCAT ACGTCAGCGT
GACGAACTTC GACACGCTGC AATCCAGCGT AAGGATCAGG TGGAAAAACT TCAAGCTTTG
CAGTTGCTTG AAGCGATTGC CGAAGGCTCA AGTGATGCGA TATATGCAAA AGATTTCGAT
GGGCGCTATC TCTTACTTAA TCGTGAGCTT TGCCGTTTTC TGGGTAAGAG TCGGCAAGAA
TTATTGGGGC GAGATGATCG CGAAGTCTTC CCCTCCGAAG ATGCTCAAAG AATCAGGAGC
GACGATCAGA AAACCATGCA AAACGGGCTC ATCGAGAGTG CCGAGGAATC ATTGCCGACA
ACAGGAGGTC GTCGTACTTT TCTTACAACC CGAGGTCCAT TGCGCGATCA GGAAGGAAGG
GTAATCGGTG TCTTTGGCAT AGCGCGCGAC ATCACCGAAA GAAATTTCCA GGAGCGAGAA
ATTAGAGCAG GACAGTCTCG TTTTCAGGCC ATCTTCGATG GAGTGAACGA TGGAATCGTT
CTCCACGACT TCAGCAATGG CATGATCCTG GAAGGCAATG TCAAGGTTAC TGAAATGTTC
GGTTATGGTC GTCAAGAAAT TAGACACCTC ACCATTGTCG ATTTAAGTTC AGACACGACT
CCATTTACGC GAGACGTGCT TTCCAAATGG CTTGAGCGGG TTAATCAAGG AGAATCACCC
GTTTTCGAAT GGATGGCCAA GCACAAGGAC GGACATCTCT TTTACGTTCA GATTAGTATG
CGAATGGCTG AAGTATCAGG TAGATCGTGC GTGCTAGTGC TGATAAGCAA ACTGCGCGAT
CGGGAAGAAA TTAACCAAAT ACCTATTCTC CTGTAA
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| Protein sequence | MKIDRPALQI AGIYALIGIS WTIFSDQVLL AMTPDLLVFS WIGTWKGVAF IFATACTIYL
ISKPRVRIEN RASWNGISEP GTGSLVLVFA VLAGVILLAG FVLVAQMTAK QRNSEIERLQ
AIADLKVGQI LAWLTERDAD AKMILSDDSL VNLYLDWRQS ESTLARRRLI ERLHSYKTSK
DYIEVVLLGI DGDQYSTSAN SEILTKLPAV QAAVKEAHTT GQLLNTDIYR DEEGKLGRVH
LDFVVPLRSG SIKQELTVVI RTDPNRFLFP FIQSWPIPSA SAETLLFRRE GNNVLFLNEL
RHRSDTSVRL QVPVDEKNLL ASQVLRGDAL PDQAVEGMDY RDIPVLGVVK AIPGTPWFLV
AKLDKGELYA GAKRDAGWIA LADILALIVA AVATIFIRQR DELRHAAIQR KDQVEKLQAL
QLLEAIAEGS SDAIYAKDFD GRYLLLNREL CRFLGKSRQE LLGRDDREVF PSEDAQRIRS
DDQKTMQNGL IESAEESLPT TGGRRTFLTT RGPLRDQEGR VIGVFGIARD ITERNFQERE
IRAGQSRFQA IFDGVNDGIV LHDFSNGMIL EGNVKVTEMF GYGRQEIRHL TIVDLSSDTT
PFTRDVLSKW LERVNQGESP VFEWMAKHKD GHLFYVQISM RMAEVSGRSC VLVLISKLRD
REEINQIPIL L
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