| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2561 |
|---|
| Symbol | |
|---|
| ID | 3567440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2759985 |
|---|
| End bp | 2761322 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637681028 |
|---|
| Product | DNA repair exonuclease-like protein |
|---|
| Protein accession | YP_285764 |
|---|
| Protein GI | 71908177 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0420] DNA repair exonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 65 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.215391 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCA TCGCGCATTT CTCCGATCTG CACTACGGCA CAAAAAACCG GGTGGAGGCG
GATCGCTGTT TCGGCGCCGC CATCGACCGG GCCATTGCCC TGGGGGTAGA AGCAGCCGTG
CTGTCGGGGG ATGCCACCGA CCATGCACTG GACTTGCATG CACCGGCCGC CGAACGACTG
TTCGCCCAGG TGCGGCGACT GGCCGAGCAT TGTCCGGTGC TGATGCTGCA AGGTACGTTT
TCACATGAGC CGCCGGGTAC CCTGGCTATT TTCAAGCTGC TGGGCGGTCG CTATCCGGTG
CATGTGGCCG AGCGTATTGA ACAAGTGGCA CTCACCGCCC AGGGGCAATG GCTTGTTTCG
ACAGGCTGGT GCTTCGACCA ACTGCCGGCC GGTGCTCGTG CCTTATTCTC CTGTGTACCC
ACGGTGAACA AGGCGGTGGT CGCCGCAGCG GTCGGTGCGG CGGATGCAGC ACAGGCAGTT
GGCGAGCACC TGGCCGTCTT GTTGCGCGGC TTTGTGCCGA CCAATCGGGC CGCACAGTTG
CAAGGCCTGC CCACCATTGG CATCTCGCAC GGCACCGTAT TCGGCTGCTT GAGCGAGCAC
GGCGTGCCAA TGGCCGGCTT CGATCATGAA TTCACCACCG GGGCGCTGTT CGCAGCCGAG
GCGCAGGCCT TCATGCTTGG GCATATCCAT CGGCATCAAT TCTGGGAACA GGCGGGCAAG
GCTGGTCGGC AGTGCATTGC CTATCCCGGT TCCATCGGCC GTTTTCACTA CGGCGAAGAA
GGTGAGAAGG GGTTTCTGGT GTGGGAAGTC GATTCCGATC AGGCACGCTT TGCACTGGCG
CCGACGCCAG CCCGTCGAAC GGTCGACGTT GTGTTCGACG GCAAACCAGA CCTCGAGGAA
CTCCGCGCTG CCATCGCCCA ACAGGATATC GCCAGTGCCT TCGTGCGGGT GCGCTGGACG
GTTGCCGATG AAGATCGTCA TCAAGTCGAC CGTCGGGCGA TTTTGCGCTT GCTGGAGGGG
GCGGCGGAAA CCAAGTTAGA AGGGCGCATC GTACCGGTGG TACGGACACG GGCAGCCGGT
ATCTCGCAGT TGGCGCAGAT GGAAGACAAG GTGCGAGTAT GGGCGCAGGT AACCGAGATC
AGAGTGGAGC CACTGCTCGA CTGTCTTGAG GCGCTGGCAA CCCAGAACCC TGAACAGCTT
GCTGATCGTT TGCTTGACGG TGGTCGTTGC GCGCCTCCGC TGCCTGCCTG TGATGAGGCG
AGACCTATGC CAAGTATTCC GCTACTGGAA CACACACCCA GAGATGGGCA CCAGTCGGCA
ATACTGGAAC TATTTTGA
|
|---|
| Protein sequence | MIRIAHFSDL HYGTKNRVEA DRCFGAAIDR AIALGVEAAV LSGDATDHAL DLHAPAAERL
FAQVRRLAEH CPVLMLQGTF SHEPPGTLAI FKLLGGRYPV HVAERIEQVA LTAQGQWLVS
TGWCFDQLPA GARALFSCVP TVNKAVVAAA VGAADAAQAV GEHLAVLLRG FVPTNRAAQL
QGLPTIGISH GTVFGCLSEH GVPMAGFDHE FTTGALFAAE AQAFMLGHIH RHQFWEQAGK
AGRQCIAYPG SIGRFHYGEE GEKGFLVWEV DSDQARFALA PTPARRTVDV VFDGKPDLEE
LRAAIAQQDI ASAFVRVRWT VADEDRHQVD RRAILRLLEG AAETKLEGRI VPVVRTRAAG
ISQLAQMEDK VRVWAQVTEI RVEPLLDCLE ALATQNPEQL ADRLLDGGRC APPLPACDEA
RPMPSIPLLE HTPRDGHQSA ILELF
|
|---|
| |