Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2546 |
Symbol | |
ID | 3567522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 2740380 |
End bp | 2745389 |
Gene Length | 5010 bp |
Protein Length | 1669 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637681013 |
Product | helicase, C-terminal |
Protein accession | YP_285749 |
Protein GI | 71908162 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG4646] DNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.26749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGTC GTTCCACTGC GCCTTCCATG TGGCTGCCCG GATTCGATCC GGACGAGCCC GAGCCCCCTA CCCTGCCGAA ACTGGCAATC CCCATCGTCA TTCCGACGGT GGACGCGGCC TTGGCGGAAT GCATCGAAGC GACTCAGATC GAGACGCCCG AACCTGCCAT AGTTGCCCGC GCCAGTTGGC GCACGACCAG CCAGGTCGTC GAGGCCGCAC CACGCATCCT GTGGCCGCGC CTCACCAGTG CCGGCCGGCT CTATCCGGTC GGCGCCGTCG CCAAGTTCGA GGCCAATCTG GTGGCCATCG ACACCCTGCA ACGGATGGAG AACGAGAACC GCATACCCAG TGCGGAAGAG CGCCAGGCCC TCCTGCGCTA CACCGGCTGG GGCGGTCTGC CGGCGAGTTT CAACCTGGAT ACGGACGAGC CCGCTTGGGC CGAACGCGCC CGACGGTTGC AGGACCTGCT GCCAGCCGAG GATTACGCCT CTGGGCGGGC CTCCGTGAAC AACAGCCACT ACACCGAGAT TCACGTGATC GAGGCCATGT GGCAGGCAAT ACATCGATTC GGCTTCAGCG GCGGCCGCGT GCTCGAACCC GCTGCCGGCA TCGGCCATTT CATCGGCACC ATGCCGGAGG ATTTGGCCGG GTGCAGCACC GTCACCGCCA TCGAGATCGA CCGCCTTTCG GGTCGCATCC TCCAGGCGCT CTATGCCTCC GGCGGCGCGG ACGTGCGGAT CGCTCCCTTC GAGAAAACGC CGCTGCCCGA GAACTGGTTT GATCTGGTGA TCGGCAACGT TCCTTTCGGC AAGTACCAGG TCGCCGACCA GAGCAACCGG GCCTATGCCC ACTACAACAT CCACAACTAT TTTCTCGGGC GCGCTATCGA CCTGGTACGC CCCGGTGGGC TGGTCTGCCT AATCACCAGC AGCCACACGA TGGAGTCCCG GCAAGAGACG GTACGCCAGT ATCTCGCCAG CCAGGCCCAT CTGCTGGGGG CCATCCGGTT ACCGAAAGGT GCCTTCGCCG GCATCGCCGC CACCGAGGTG CAGACCGACA TCCTGTTCCT GCGCAAGCGG CAACGCTCGG AGACGGTCGA AGCCGAGTGG CTGGACATCA CCGCGGTGCC GAACGAATTG AGGCACCCTT TGGCACCGCC GAATCGCTAC CTGCCGATCA ACGAATGGTA CATGCGGCAC CCCGAGTTCT GCATCGGTCG CATCCGTAGC GAGAGCAACG GCTACGAGGA AGTCCCGATG GCAGTTTTCG AGGGCGACCT GGAAGCGGCC CTGCGCGAGC GCATCGCCTT GCTGCCCACC GGCGTCTTCG AGCCGGTTAA GCACGCAACG GCACCGCTAC GTGTCGTGGT GCCGGCCGAA GCCGGTGCCC GTCCCGGTAG CTTCCGTCTG CATCAAGGGC GGGTGCATCG GGTCGAAGGC GGCGAACTGG TCGATGTCCA TGACCAACTC AATGCCACGC AGCGGGGCCA GATCACCGGC ATGTGCGCGA TCCGCGACCA TGCCCGGACC CTGCTCGATG CGCAACTGGA GGACGAGAAC AATGGTCGTC TGGGTCACCA GCGGGCCATG CTCAACGGCA CCTACGACCG CTTCGTCGCC AAGTACGGCT GCCTGACGGC CCGGGCCAAC GCGCTGGCAT TTCGGCGCGA CCCGGACTAT CCGCTGCTGC TGTCCCTGGA GCACTACGAT GAGGAATCGG GCACGGCGCG CAAGGCGGCG CTGTTCTCCC AGCGCACATT GAGCCGCGTA GTCGAACCCG ATCGTGCAGG CGAACCGAGC GAGGCACTGG CCGCCTCGGT GCAGTGGCGA GGCCGGGTCG ATCCGGCCTA CATGGCCGGG CTGCTGGAAG CACCGGAAGC CGAAGTCATG GCTATGCTTG CCAGCGCCGG CCACATTTTC CTGGACCCGA TGGATGGGGA CTGGAAGACC GCCGACGACT ACCTGTCGGG CAACGTGAAA ACGAAGCTCA AACAGGCGGC GCTGTCGGGA CCGGCGTATC GGCGCAATGT CGAGGCGCTG GAACGGGTAC AGCCCGAGGA TCTGCCGCCG GCGGCCATCG AGCCGCGCCT GGGCGCGGTG TGGGTTCCGG CCCATGACGT CGAGACTTTC GTCCAGGAAG TGCTGGAACT GAAGGACTGC CAAGTGGGCT ACTCGGCCGA GGCTGGTGCC TGGTCGGTGA AGTACGGCGA GTGGGAAGCC CGGCAGAACG TCAAGGTAAC CCAGGAATTC GGCACCTCGC GCATGAACGC CATCGAACTG GTGCAGTGCG CGCTGAACGT CCAGGTGCCT ACGGTGCGCG ACCGCGACCC GGAGACCGAC AAGTACTACG TCAATGCCGA CGAAACCTTG GCCGCCCGGG AAAAACTGGG CCTGGTCAAA GAACGTTTTG CAACCTGGGC CTTTTCGGAG ACTGAACGCC GCGAGCGCTT GTGCCGCATC TACAACGATC TGTTCAATGC GACGCGGCCG CGCCACTTCG AAGGTTCGCA CCTGAAGTTG CCGGGTTTCT CCCGCTGCTT CGATCTGCAT CCGCACCAAC CGGATGCCGT TTGGCGCATC GTGCAGTCCG GAAATACCGG CCTCTTTCAC GTGGTCGGTG CCGGCAAGAC GGCGGTCTGC GTCATTGCCA GCATGGAACT GCGCCGTCTG GGGTTCGCCA ACAAGCCTTG CCATGTGGTG CCCAATCACA TGCTGGCCCA ATACACCGCG GAGTTCGTCC GGCTCTACCC GAACGCCTCG GTGTTGATGG CAAGCAAGGA AGACCTGGAG GGCGATCGCC GGCGCGAGTT GGTGTCACGC ATCGCCACGG GCGATTGGGA TGCGGTAGTC ATAACCCACT CGAGCTTCGA GCGCATCAAG TTGTCGCCGC AATTCACCGA GGGCTACATC AAGGAGATCA TCCATGAAAT AGAAATGGCG GTACGCGCCG AGAAGAGCAA CGACCGGTCG AACCGGATCG TCAAGCAACT CGAGGCGATG AAGAAAAGCT GGCAGGTCCG GCTGGAAAAG CTGTCCGCCG ACAGCAAGAA GGACGATCTG CTGACCTGGG AGCGACTGGG CATCGACTGG CTGTTCGTCG ATGAAGCCCA CTTGCACAAG AACCTCTACC GGTTCACCAA GATGACCCGG GTGGCAGGCC TGCCGCTGAC CAGTTCGGAG CGCGCCTTCG ACCTCTTCCT GAAGACGCGC TACACCATGC AGCGCCACGG CAATGCGCAG CGCGGCGTGG TGTTCGCGAC GGCAACACCG GTGGCCAACA CCATGGCCGA AGTCCACACG ATGATGCGCT ACCTGCAGCC CAAGCGGCTG GAGGAACTTG GGCTACAACA GTTCGATGCC TGGGCGGCGA CCTTCGGGGA GAGCGTGACG GCGCTGGAAA TCGCGCCGGA CGGCAGCGGC TATCGCATGC ACACGCGCTT CGCCCGGTTC ATCAACGTGC CCGAGCTGAT GGCGGTGTTC GGCGAAGTGG CCGACATCCG CACGGCGGAG ATGCTGGCCC TGCCGGTGCC AAAGTTGCGT GGCGGCAAGC CGCGAGTCGT CGCCTGCCCG GCCAGCCCGT CGTTGAAGGC CTTCGTGCAG ACCCTGGTGT TGCGCGCCGA GGCGATCCGC AACGGCGAGG TCGATCCGAA GGACGACAAC ATGCTGGCGG TGACCACCGA CGGCCGCAAG GCCGCGCTGG ACTTCCGGCT GGTGGCACCG ACGGCCCGCT TCGACGATAA CGGCAAGGTG GCTGCCTGCG TGCGGGAAGT GCATGCCATC TGGCAGCGCA CGATGGATTT CCGCGGTGCG CAGTTGGTAT TCTGCGACTT GTCGTCCCCC AAGGGCGGCA AGACGTTCAG CGTCTACGAC GACTTGCGGG CGCGGCTCAT GGCAGCGGGC ATTCCCGAGA AGGAAATCGC CTTCGTCCAT GACGCCGAGA GCGATGCTCA GAAGGCTGCG CTGTTCAAGG CGGTCCGGGA AGGCCGGGTG CGGGTGCTGT TGGGCTCCAC CGCCAAGATG GGGGTGGGCA CCAACGTGCA GACGCGCCTC GTGGCCCTGC ATCACCTGGA TGCCCCGTGG CGTCCCTGCG ATGTTGAGCA ACGCGAGGGC CGCATCCTGC GCCAGGGCAA TCTGAGCGAG GAAGTGGAAA TCTTCCGCTA CGTCACCCAG CAAAGCTTCG ACAGCTACTC ATGGCAGACG CTGGAAACCA AGGCACGCTT CATCGCTCAA GTCATGGCCG GCGACAAGGG AATCCGTTCG CTGGAAGATG TAGAACTGGC GGCCCTGTCC TACGCCGAGG TGAAAGCCTT GGCCTCGGGC AATCCATTGG TGATCGAGAA AGCCGGTGTA GACGCGGAGG TAGCCAAGTT CTCGACGCTG TTCTCGGTGT GGCGCAACCA GCGCTTTGCC AATGAGGGCG AGGTGAGCCG GTTGCCGATT ATGATCGAGG CGCTGGAAAA CAAGATCGCG CTCTATGCAC AGGATTTGGA ACGAGTTGAA ACCCCAACCT TCCAGGGCCT CGCCCTGGAA CTCGGCCGCC GGCGGATTGT CGGCGCCGAT GCCGTGGGCG AGGCGCTGCG CGGCCTGGTG AAGTCCGCGA AGGACGAAGT GCAGACGGCA AACCGCCCGA TCGAACGCGT CGTCGGCCGC TTCGGCGGCT TCGATCTCGG TGTGCGAGCC ACCCGGAGCG GTGAAGTGCC CAATCTCTAC TTGTCCGGGC ACTGCCTGTA CCAGGCCGAT CCCTATCAAA CGGGTCCGGC TCTCGTCGCC GCCCTGCTTG GTGCTTTGGA ATCGATAGCC AAGCACCACA CCGATGCCGG GACACTGTTG GCAACCCGGC AAAAGAGGCT GGAGGATCTT CGGTTGGAAC TGACCCGCCC CTTCGAGTAT GAAGGCCGCC TGACCGATCT ATTGATTCGG CAGCGCGAAC TGCTCAGGCA ACTCGACCTG GACAAAGATG AGGCGGGCAT CGGGAAAATC GACACCGAAG ATCTGCGGCA AACTGCTTGA
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Protein sequence | MARRSTAPSM WLPGFDPDEP EPPTLPKLAI PIVIPTVDAA LAECIEATQI ETPEPAIVAR ASWRTTSQVV EAAPRILWPR LTSAGRLYPV GAVAKFEANL VAIDTLQRME NENRIPSAEE RQALLRYTGW GGLPASFNLD TDEPAWAERA RRLQDLLPAE DYASGRASVN NSHYTEIHVI EAMWQAIHRF GFSGGRVLEP AAGIGHFIGT MPEDLAGCST VTAIEIDRLS GRILQALYAS GGADVRIAPF EKTPLPENWF DLVIGNVPFG KYQVADQSNR AYAHYNIHNY FLGRAIDLVR PGGLVCLITS SHTMESRQET VRQYLASQAH LLGAIRLPKG AFAGIAATEV QTDILFLRKR QRSETVEAEW LDITAVPNEL RHPLAPPNRY LPINEWYMRH PEFCIGRIRS ESNGYEEVPM AVFEGDLEAA LRERIALLPT GVFEPVKHAT APLRVVVPAE AGARPGSFRL HQGRVHRVEG GELVDVHDQL NATQRGQITG MCAIRDHART LLDAQLEDEN NGRLGHQRAM LNGTYDRFVA KYGCLTARAN ALAFRRDPDY PLLLSLEHYD EESGTARKAA LFSQRTLSRV VEPDRAGEPS EALAASVQWR GRVDPAYMAG LLEAPEAEVM AMLASAGHIF LDPMDGDWKT ADDYLSGNVK TKLKQAALSG PAYRRNVEAL ERVQPEDLPP AAIEPRLGAV WVPAHDVETF VQEVLELKDC QVGYSAEAGA WSVKYGEWEA RQNVKVTQEF GTSRMNAIEL VQCALNVQVP TVRDRDPETD KYYVNADETL AAREKLGLVK ERFATWAFSE TERRERLCRI YNDLFNATRP RHFEGSHLKL PGFSRCFDLH PHQPDAVWRI VQSGNTGLFH VVGAGKTAVC VIASMELRRL GFANKPCHVV PNHMLAQYTA EFVRLYPNAS VLMASKEDLE GDRRRELVSR IATGDWDAVV ITHSSFERIK LSPQFTEGYI KEIIHEIEMA VRAEKSNDRS NRIVKQLEAM KKSWQVRLEK LSADSKKDDL LTWERLGIDW LFVDEAHLHK NLYRFTKMTR VAGLPLTSSE RAFDLFLKTR YTMQRHGNAQ RGVVFATATP VANTMAEVHT MMRYLQPKRL EELGLQQFDA WAATFGESVT ALEIAPDGSG YRMHTRFARF INVPELMAVF GEVADIRTAE MLALPVPKLR GGKPRVVACP ASPSLKAFVQ TLVLRAEAIR NGEVDPKDDN MLAVTTDGRK AALDFRLVAP TARFDDNGKV AACVREVHAI WQRTMDFRGA QLVFCDLSSP KGGKTFSVYD DLRARLMAAG IPEKEIAFVH DAESDAQKAA LFKAVREGRV RVLLGSTAKM GVGTNVQTRL VALHHLDAPW RPCDVEQREG RILRQGNLSE EVEIFRYVTQ QSFDSYSWQT LETKARFIAQ VMAGDKGIRS LEDVELAALS YAEVKALASG NPLVIEKAGV DAEVAKFSTL FSVWRNQRFA NEGEVSRLPI MIEALENKIA LYAQDLERVE TPTFQGLALE LGRRRIVGAD AVGEALRGLV KSAKDEVQTA NRPIERVVGR FGGFDLGVRA TRSGEVPNLY LSGHCLYQAD PYQTGPALVA ALLGALESIA KHHTDAGTLL ATRQKRLEDL RLELTRPFEY EGRLTDLLIR QRELLRQLDL DKDEAGIGKI DTEDLRQTA
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