| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2527 |
|---|
| Symbol | |
|---|
| ID | 3567561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2724288 |
|---|
| End bp | 2724812 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637680994 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_285730 |
|---|
| Protein GI | 71908143 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.000000792661 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0676668 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCTG GTGCCGTCTT GATCCTCTTG CTCATCTGGG TACTTTGTCG TCTGGAGCGC
CAAGGGGATC AAACTTGGTT ACCGCGGGAG TTGCGACGGT CGACGCTTGT CTACGCAGAA
AAACTATTCC GTGCCCCTGG CCTAATAACC CTGACGGCGA AGGTCGACCG TGGATACCGT
GATCCGGCCG GGATCATTAT CCTTGTTGAG CTGAAAAATC GGCAGCGTGA CCGCGTGTCC
CCATCGGACG TAATTGAACT CTCCGCGCAG CGGGTGGCTG TTATGGCGGA GACAGGAGGG
CAGGTGGCCT TGCATGCCTA TGTGATCGTG CAACGACCAT CGGGTCGCCG TGTTGTTCAC
CGAGTCGGAT TGCTCGATGT TGTCGAGGTG GGAGCCTTGA TCCAACGGAG GGAGTCGATT
CTGATAGGAA GAGCAGCCCC CCGATGTTCG CGCTCAGTTC GTCTGTGCCG TGGGTGTGTT
TTTCAGCGCC GGTGTACGGA GCTGCCGTGG TGCGCCGGTC CCTGA
|
|---|
| Protein sequence | MIAGAVLILL LIWVLCRLER QGDQTWLPRE LRRSTLVYAE KLFRAPGLIT LTAKVDRGYR
DPAGIIILVE LKNRQRDRVS PSDVIELSAQ RVAVMAETGG QVALHAYVIV QRPSGRRVVH
RVGLLDVVEV GALIQRRESI LIGRAAPRCS RSVRLCRGCV FQRRCTELPW CAGP
|
|---|
| |