| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2524 |
|---|
| Symbol | surE |
|---|
| ID | 3567558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 2721516 |
|---|
| End bp | 2722256 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637680991 |
|---|
| Product | stationary phase survival protein SurE |
|---|
| Protein accession | YP_285727 |
|---|
| Protein GI | 71908140 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000000000000294011 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0686977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTC TGCTCAGTAA TGATGACGGC TATTTCGCAC CGGGTCTTGC CGCACTGGCT
GAAGCTCTGG ATGGTCTCGG CGAGGTCGTC GTGGTTGCCC CTGAGCAGAA TCGCAGTGGT
GCCAGTAATT CGCTGACACT GGATCGGCCG CTGTTGCTAA AAAAAGCGGC CACTGGTTTT
TATTTCGTGA ATGGCACGCC GACTGACTGT GTCCATCTGG CTGTGACTGG CATGCTCGAC
AAATTGCCGG ATATTATTGT GTCCGGAATT AATCTGGGTG CCAATATGGG CGACGATACG
ATTTATTCCG GAACCGTTGC AGCAGCAACG GAAGGGTATT TGCTGGGGAT TCCCTCCATC
GCTATTTCCA TGACTAGTTT TGAGGGAAAT AACTTTGCCT CGGCTGCTCG GGTGGCGCGT
GAATTGGTTG AGCGTTTTAT TCGCAATCCA ATTAGCGAGC CGGTTTTGCT GAATGTAAAT
GTTCCCGATA TTTCCTATTC CGACCTAAAG GGCACAGAGG TGACTCGTCT TGGTCGTCGG
CATAAGGCGG AACCAGTTGT CAAAATGCAG TCGCCTCGCA ATGAGACCGT TTACTGGGTT
GGTGCTGCAG GTGCGGCGGC GGATGCGGGG CCGGGGACTG ACTTTAATGC GGTCGAACGA
GGCTTTGTTT CGATTACGCC CTTGCAGATT GATCTGACGC ATTCGGCGCA GCTATCCCAT
ATCGATCAGT GGATGAAGTG A
|
|---|
| Protein sequence | MRILLSNDDG YFAPGLAALA EALDGLGEVV VVAPEQNRSG ASNSLTLDRP LLLKKAATGF
YFVNGTPTDC VHLAVTGMLD KLPDIIVSGI NLGANMGDDT IYSGTVAAAT EGYLLGIPSI
AISMTSFEGN NFASAARVAR ELVERFIRNP ISEPVLLNVN VPDISYSDLK GTEVTRLGRR
HKAEPVVKMQ SPRNETVYWV GAAGAAADAG PGTDFNAVER GFVSITPLQI DLTHSAQLSH
IDQWMK
|
|---|
| |