| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2521 |
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| Symbol | |
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| ID | 3567555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2719020 |
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| End bp | 2719949 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637680988 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_285724 |
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| Protein GI | 71908137 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.00206126 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.016684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATA CCGGCGAGGG TCTGGAGGAA GAGTTCGAGG GGCAGCCCGA TGAAACGGTC
CTGCCTCCTG AGCCTGAACG CGTTCTGCCG GAAATTGAAC TGCTTGAGGA TGTCACCCAG
CTTTACCTGA GTGAGATTGG CGCCAAGCCG CTCCTGACTC CCGCTGAAGA ACTGGCCACC
TCCCGGCTTG TCCGGGAAGG TGACTTTAGC GCACGCCAGC GCATGATCGA ACACAATCTG
CGGCTGGTTG TAAATATCGC CAAACATTAC CTGAATCGGG GGATTCCTCT GCTCGACCTG
ATCGAGGAGG GAAATCTGGG ATTGATCCAT GCCTTGGAGA AATTCGATCC GGAGCGTGGC
TTCAGGTTCT CGACCTATGC GACTTGGTGG ATACGCCAGA ATATCGAGCG CGGCATCATG
AACCAGTCGC GGACGATCCG TTTGCCGGTG CATATCGTCA AGGAAATCAA TGTCGTCCTG
CGGGCTATGC GCCACTTGGA ATCGGCGGAC AAGCGGGATT CGACGGTCGA GCGCATTGCG
CTCCTGATTG ATCGGCCGGT CGCCGATGTA CGGCGTATCC TGTCGCTCAA TGAGCATATT
GCGTCTCTCG ATGCGCCACT GGAAATCGAC CCCAATCACA CGATGGCCGA GGTTATCGCC
GACGATGGAG AGAGCGATCC GGAGTCCTTG CTGCAGTCGA GCGAGGTCGG TTCGCTGGTT
GATGACTGGC TGGAGCAATT GACCGAACGG CAACGTTCAG TGATCGAGCG CCGCTATGGC
CTGAGCGGGG CCGATTTGGC GACGCTGGAC GTGATAGCCT GCGATCTCGG ATTGACCCGC
GAACGGGTCC GGCAGATCCA GATGGAAGGT CTGGATCGCC TGCGCAAGAT CATCAAGCGC
GGCAATATTT CTCGCGATTC GTTGCTGTAG
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| Protein sequence | MSDTGEGLEE EFEGQPDETV LPPEPERVLP EIELLEDVTQ LYLSEIGAKP LLTPAEELAT
SRLVREGDFS ARQRMIEHNL RLVVNIAKHY LNRGIPLLDL IEEGNLGLIH ALEKFDPERG
FRFSTYATWW IRQNIERGIM NQSRTIRLPV HIVKEINVVL RAMRHLESAD KRDSTVERIA
LLIDRPVADV RRILSLNEHI ASLDAPLEID PNHTMAEVIA DDGESDPESL LQSSEVGSLV
DDWLEQLTER QRSVIERRYG LSGADLATLD VIACDLGLTR ERVRQIQMEG LDRLRKIIKR
GNISRDSLL
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