| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2516 |
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| Symbol | |
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| ID | 3567935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2713133 |
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| End bp | 2714098 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637680983 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_285719 |
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| Protein GI | 71908132 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 0.0900829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.296848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGTT TTGTGCGCTG CTTCGCAGAG AGAGAACAAG TGACGACCAC TGCCTTCATT
ACCCATCGCG ACTGCCAGTT GCACGATATG GGGTCGCATC ATCCTGAATG CCCGCAGCGT
TTGACCGCCA TCAACGATCA CCTGATCGCT CAAGGGATCG ACGCTTACTT TACCTACTAC
GACGCACCGC TGGCCACTTT CGAGCAATTG TTGCGTGTTC ACCCGGCTTC GCATCTTGAG
CGCATCAAGC GTGCCTCACC GGAGCTGGGG GTGGTGCACC TGGATCCGGA TACCGCGATG
AACCCGCATA CTTGGCAGGC TGCGCTACGC GCCGCTGGTG CAGGCTGCAT GGCGGTTGAT
CTGGTGCTGA ACAAGGAGGT CGAGAATGCT TTCTGTGCTG TTCGCCCGCC TGGTCACCAT
TGCGAGAAAG CCACGCCGAT GGGCTTCTGC TTCTTCAACA ACATTGGCGT TGCCGCGCGT
CACGCCTTGA AGGTACACGG CCTGGAGCGC GTTGCCATCA TCGACTTTGA CGTGCACCAC
GGTAACGGTA CTGAAGACTG CTTTGCCGGC GACGAGCAGG TGCTGATGTG CAGCATCTTC
CAGCATCCGT TTTATCCGTA TAGTGGCGCC GACAAGCCAG CTGCCAACAT GTGCAATGTG
CCACTCGCCG CAGGCTGTGG CGGAGAAGAG TTCCGCGATG CAGTGATGCA GGTATGGACG
CCGCGCCTCA AGGAGTTCAA GCCGCAGATG ATCTTCATTT CCGCCGGCTT CGACGGACAC
TACGAAGACG ACATGGGCGG TCTGAAACTG GTCGAAAAGG ACTTCGCCTG GTGCACCGAA
CATTTGAAGA AACTGGCCGC TGAAATGTGC GAAAAGCGCA TTGTCTCCAT GCTGGAGGGC
GGTTATGTGA TGACCTCGCT GGCCCGTAGC GTGGGCGCAC ATCTGCGGGC GCTGGCAGAC
CTCTAG
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| Protein sequence | MRRFVRCFAE REQVTTTAFI THRDCQLHDM GSHHPECPQR LTAINDHLIA QGIDAYFTYY
DAPLATFEQL LRVHPASHLE RIKRASPELG VVHLDPDTAM NPHTWQAALR AAGAGCMAVD
LVLNKEVENA FCAVRPPGHH CEKATPMGFC FFNNIGVAAR HALKVHGLER VAIIDFDVHH
GNGTEDCFAG DEQVLMCSIF QHPFYPYSGA DKPAANMCNV PLAAGCGGEE FRDAVMQVWT
PRLKEFKPQM IFISAGFDGH YEDDMGGLKL VEKDFAWCTE HLKKLAAEMC EKRIVSMLEG
GYVMTSLARS VGAHLRALAD L
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