Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2495 |
Symbol | |
ID | 3568044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2694136 |
End bp | 2695014 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637680962 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_285699 |
Protein GI | 71908112 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 0.197012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTA GCCTGCGTCA GCTTGAGGTT TTTGCCGCTG TCGCCAGCCA TGCTCAGGTG ACACGGGCGG CACAGGCGGT TGCCATGAGC CAAGCGGCGG CCAGCATGGC GCTGGCCGAT CTGGAGGGGC AACTAGGCAC GCCGCTGTTC AATCGACAGG GGCGACAGTG GCAACTGACC GACAGCGGTC GGGAAATCCT GCCGCTGGCC CGCGAAGTGC TCGATCGGGT GGGCGATATC GAAGCCGTCG CTCAGACCCG CGGGGCGGCT TTCGACATTC ATCTCGGAGC CAGTGTGACC ATCGGCAATC ATCTGCTGCC CGAACTGATC GTCGACTTGA ACCGCCGCTA TCCAGCCAGT CATATTCAAG TGTCGCGCCA CAATACCGAA CAGGTCGTGG CGCGCTTGCT GACTTTTCAG ATCGATCTCG GTTTCATCGA GGGGCCGGTC AATGATCCAC ATATCGCCTG TTTTCCGTGG CGCCGGGATG AGTTGCAGGT GTTCGCGGCA CCGGATCACC CTTTGGTCGA TCGGCAAGTA AGCGTGGAAG ACTTGCGTTC AGTCGGTTGG GTCTGTCGGG AGTCCGGGTC CGGTACGCGC GAGCATTTCG ACCGGGCCAT GGCAGAGTCC AGTATTGCGC CACGTATCGT GCTCGAACTC GAACAGCCGG AAGCCGTGCG CCAGTGCGTG CGCTTGGGCC TCGGGCTGGG CTGCCTTTCG TTGCTCGAAT TGCGCGATTC ATTTCAGGCT GGTTGGCTGG TGCCGTTGGC GACGCCATTT CTTAACCTGT CGCGGCAGTT GCGAATTGCG CTGCATGCCC AGAAGCATCG AACCCGCGGC ATCCAGGCCG TGCTTGATCT CTGCCAGAGC GAGACGTGA
|
Protein sequence | MKISLRQLEV FAAVASHAQV TRAAQAVAMS QAAASMALAD LEGQLGTPLF NRQGRQWQLT DSGREILPLA REVLDRVGDI EAVAQTRGAA FDIHLGASVT IGNHLLPELI VDLNRRYPAS HIQVSRHNTE QVVARLLTFQ IDLGFIEGPV NDPHIACFPW RRDELQVFAA PDHPLVDRQV SVEDLRSVGW VCRESGSGTR EHFDRAMAES SIAPRIVLEL EQPEAVRQCV RLGLGLGCLS LLELRDSFQA GWLVPLATPF LNLSRQLRIA LHAQKHRTRG IQAVLDLCQS ET
|
| |