| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2480 |
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| Symbol | |
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| ID | 3568101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2678864 |
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| End bp | 2681998 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637680948 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_285685 |
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| Protein GI | 71908098 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.578305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACG CCCTGATCGA CTGGTCGGCC CGCAACCGAT TCCTGGTGCT ACTTACCACG
CTGTTCATCA TCATCGCCGG CACCTGGTCG GTGCTGAAGA CGCCGCTCGA CGCCATCCCC
GACTTGTCCG ACGCCCAGGT CATCCTGTAC ACCGAATTTC CCGGGCAGGC GCCGCAGGTG
GTCGAGGACC AGGTTACCTA CCCGCTGACC ACCGCCCTGC TCTCGGTACC GAAATCCAAG
GTCGTGCGCG GCTTTTCGTT CTTCGGCGCC TCTTTCGTCT ACGTCATTTT CGAGGATGGC
ACCGACATCT ACTGGGCGCG TTCGCGAGTG CTGGAGTATG TGAATTCGGT GTCCGGCAAG
CTGCCGAAGG GCGTCAATCC GACCCTCGGC CCGGATGCCA CCGGGGTCGG CTGGGTCTAC
CAGTACGCCG TGCTGGCCAA GGATAAAACG CTGGCCGAAC TGCGCACGCT GCAGGACTGG
TACCTGCGCT ACCAGCTGGC CAAGGCGCCC GGCGTCGCCG AGGTGGCGAG TATCGGCGGC
TTTGTGCAGC AGTATCAGGT CACCGTCGAT CCTGTGAAGC TGCGCGCATT CGGTATTCCG
CTGATGCGCG TCGCCGAGGT GATCCGCAAT TCCAACCGCG ACGTCGGCGG CCGCACGCTG
GAAATGGCCG AAACCGAGTA CATGGTGCGT GGCCGCGGCT ATCTGCGCGG CAAGAGCGAC
ATTGAGCAAC TGGTCCTCAA GGCACAGAAT GGCACGCCAG TCCGCATCGC CGACATCGGC
CGGGTCGAGC TGGTGGCTGA CGAACGGCGC GGCATTACCG AACTGAACGG TGAAGGCGAA
GTGGTTTCCG GCATCGCCAT GTCGCGCTAC GGCCAGAACG CGCTGGAGGT CATCCACAAC
CTGAAGGCCA AGGTCGCTGA AATCTCCGCC GGGCTACCGG AAGGCGTCAG CATCGCCACC
GTCTATGACC GCTCCGAACT GATCGAGCGC GCCATCGCCA CGCTGAAGCG CACGCTGGCC
GAGGAAAGCC TGATCGTCGC GCTGGTCTGC GTCGTCTTCC TGTTGCACCT GCGCTCGGCG
CTGGTCGCCA TCATCATGCT GCCGGTCGGC ATCCTGGCCG CCTTCATCGG CATGCGGGCG
ATTGGCGTCA ACGCCAACAT CATGAGCCTG GGCGGCATCG CCATTGCCGT CGGCGCGATG
ATCGACGCCG CCATCGTGAT GATCGAAAAC GCCCATAAGC ACCTGGAGCG GCTGCAACCG
GGCGAATCAC GGAGCGATGC GATGATCGCC GCCTGCAAGG AGGTTGGCCC CGCCCTCTTC
TTCAGCCTGC TGATCATCAC CGTCTCCTTC CTGCCCGTCT TCACGCTCGA AGCGCAGGAA
GGCCGGCTGT TCGCGCCGCT GGCATGGACC AAGACCTTCG CCATGGCCGC CGCCGCCTTC
CTGTCGGTGA CGCTGGTGCC GGTGCTGATG CTGCTGTTCA TTCGCGGCGA CATCAAGCCG
GAAGCGCAGA ATCCGGTCAA CCGCGTGCTG ATCCGCCTGT ACCGCCCGAT CATCGCCTGG
GTCATGCAGT GGAAGAAGGC AACCATCGCC GCCGCCCTCG TTGCCATGGC AATCACCCTC
GTCCCGGCCA GCCGTCTGGG TTCGGAATTC ATGCCGACGC TCAACGAAGG CACGCTGTTC
TACATGCCGA CCACCCTGCC CGGTCTGTCG GTGACCAAGG CGGCTGAACT GCTGCAGACC
CAGAACAAGA TCATCAAGAG CTTCCCGGAA GTCGCCTCGG TGTTCGGCAA GGCTGGCCGA
GCGCAGACGG CCACCGATCC GGCGCCGATG GAAATGTTCG AGACGGTGAT CAATCTGAAG
CCGGAAAGCG AATGGCGCCC CGGCATGACC ACTGACAAGC TGATCGCCGA ACTCGACAAG
GCGCTCCAAT TCCCCGGGGT CGCCAATTCC TGGACGATGC CGATCAAGGC ACGCATCGAC
ATGCTGTCCA CCGGCATCCG CACCCCGATC GGCATCAAGG TCTTCGGCAA GGATTTGATC
GAAATGGAAC GCCTGGCCAA GGAAATCGAG AGCGTCGTCA AGGCCGTGCC AGGGACCAGC
AGCGCCTTCG CCGAACGGAT CACCGGTGGC TTCTACCTCG ATATCGTGCC CGACCGCAAC
GCGCTGGCCC GCTACGGGCT GTCGGTCGGC GAAGTCATGG ACGTCGTGGC AGCGGCGCTG
GGCGGCGAAA TGGTCACCAC CACGGTTGAA GGCCGTGAGC GCTTCGGCGT CACCGTCCGC
TACCCGCGCG ACCTGCGCAG CGACCCGCAG GCCATCGCCC GTGAAGTGCT GGTGCCGGTA
CCGGCCGAGA TGGGTGGGGC GGCCAGCATG ATTCCGCTCG GCCAGCTGGC CGAAGTGAAG
ATCAGCACCG GCGCCCCGGC CATCCGCACC GAAAACGCCC TGCTCTCGGC TTACATCTAT
GTCGACATCC GCGATCGCGA CATCGGCTCC TACGTTGCCG AGGCGCGCCA GGCGGTCAAT
GAGAAGGTCA AATTCTCCCC CGGCACCTAC GCCACCTGGA GCGGCCAGTT CGAGTACATG
GAACGCGCCA CTGAAAAGCT CAAGGTCGTC GTGCCAATCA CGCTGCTGAT CATCTTCCTG
CTGCTCTACC TGAATTTCCG ACGCATCACC GAGACGCTGA TCGTCATGCT CTCGGTTCCC
TTCGCGTTGG TCGGCGGCAT CTGGCTAATG TGGTGGCTCG GCTACAACCT GTCGGTCGCC
GCGGCCATTG GCTTCATCGC GCTGGCCGGC GTGGCTGCCG AAACCGGGGT CATCATGTTG
ATCTACCTCG ACCATGCCTG GCAGACCGTG CAGGCGAAAT GTGCCGCCGA AGGCCATCGT
CCGCAGGCCT CGGATCTCTA CGCTGCCGTG ATGGAAGGTG CCGTCGAACG GGTGCGCCCG
AAGATGATGA CGGTCAGCGC GATCATGGCC GGCCTGCTGC CCATCCTGTG GGGCACCGGC
ACCGGCTCGG AAGTCATGAG CCGGATCGCG GCACCGATGG TCGGTGGCAT GATTTCCTCA
ACGGTGCTGA CGCTGGCCGT CATCCCATCC ATCTACGCCC TGCTGATGCA ACGACGGCTA
CGCAATGCCG CTTGA
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| Protein sequence | MLNALIDWSA RNRFLVLLTT LFIIIAGTWS VLKTPLDAIP DLSDAQVILY TEFPGQAPQV
VEDQVTYPLT TALLSVPKSK VVRGFSFFGA SFVYVIFEDG TDIYWARSRV LEYVNSVSGK
LPKGVNPTLG PDATGVGWVY QYAVLAKDKT LAELRTLQDW YLRYQLAKAP GVAEVASIGG
FVQQYQVTVD PVKLRAFGIP LMRVAEVIRN SNRDVGGRTL EMAETEYMVR GRGYLRGKSD
IEQLVLKAQN GTPVRIADIG RVELVADERR GITELNGEGE VVSGIAMSRY GQNALEVIHN
LKAKVAEISA GLPEGVSIAT VYDRSELIER AIATLKRTLA EESLIVALVC VVFLLHLRSA
LVAIIMLPVG ILAAFIGMRA IGVNANIMSL GGIAIAVGAM IDAAIVMIEN AHKHLERLQP
GESRSDAMIA ACKEVGPALF FSLLIITVSF LPVFTLEAQE GRLFAPLAWT KTFAMAAAAF
LSVTLVPVLM LLFIRGDIKP EAQNPVNRVL IRLYRPIIAW VMQWKKATIA AALVAMAITL
VPASRLGSEF MPTLNEGTLF YMPTTLPGLS VTKAAELLQT QNKIIKSFPE VASVFGKAGR
AQTATDPAPM EMFETVINLK PESEWRPGMT TDKLIAELDK ALQFPGVANS WTMPIKARID
MLSTGIRTPI GIKVFGKDLI EMERLAKEIE SVVKAVPGTS SAFAERITGG FYLDIVPDRN
ALARYGLSVG EVMDVVAAAL GGEMVTTTVE GRERFGVTVR YPRDLRSDPQ AIAREVLVPV
PAEMGGAASM IPLGQLAEVK ISTGAPAIRT ENALLSAYIY VDIRDRDIGS YVAEARQAVN
EKVKFSPGTY ATWSGQFEYM ERATEKLKVV VPITLLIIFL LLYLNFRRIT ETLIVMLSVP
FALVGGIWLM WWLGYNLSVA AAIGFIALAG VAAETGVIML IYLDHAWQTV QAKCAAEGHR
PQASDLYAAV MEGAVERVRP KMMTVSAIMA GLLPILWGTG TGSEVMSRIA APMVGGMISS
TVLTLAVIPS IYALLMQRRL RNAA
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