Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2470 |
Symbol | |
ID | 3568091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2670569 |
End bp | 2671222 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637680938 |
Product | 3'-5' exonuclease |
Protein accession | YP_285675 |
Protein GI | 71908088 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 0.774502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.494629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGCGATG TGACGATGAG CCGCAGCCAG TTGGCGGCCA GCGAACTGCC GGTTTATACC GGGGTTTCCA TTGCCCAGGT CACACTGGTC AATAGCCAGG TGCTGGCGGC GCAGGTCTTG GCCGCGCTGC TGGCGGCGCC GGTGATCGGC TTCGATACCG AATCGAAACC AACCTTCCTG AAAGGGGAGG TATCGACCGG CCCGCATCTG GTGCAACTGG CCACTGACGA GCATGTTTTC CTGCTCCCGG TCGCATTTGC CGCAAACCAT GAAGTGCTGA GGCGCATCCT TTCGGCAGCG GACATCCTCA AGGTCGGCCT CGGGCTGGGC AATGACCGAA GCGTGCTGCG CTCCCGTCTG GGTATCGAAT TGAACAATGT GCTCGACCTG GGCGAAGCGA TGCGTGGCCC GGGGCATCGC GGCACGGTCG GCGCCAAGGT GGCGGTGGCC CACTATTTCG GCCAGAAATT CCAGAAATCG AAGAAGGTGG GTACCAGCAA TTGGGCCAAT CCACGCTTGA ACGAGCGCCA GTTGCTGTAT GCCGCCAACG ACGCCCACGT CGCCTTGCAG CTCTACCATG CCTGGTTGCG TGACCCAAAG CACCGCGAAC CGGGCGCCAC CGCAATCAAT CCACAGGAAA CAACCCATGG CTGA
|
Protein sequence | MSDVTMSRSQ LAASELPVYT GVSIAQVTLV NSQVLAAQVL AALLAAPVIG FDTESKPTFL KGEVSTGPHL VQLATDEHVF LLPVAFAANH EVLRRILSAA DILKVGLGLG NDRSVLRSRL GIELNNVLDL GEAMRGPGHR GTVGAKVAVA HYFGQKFQKS KKVGTSNWAN PRLNERQLLY AANDAHVALQ LYHAWLRDPK HREPGATAIN PQETTHG
|
| |