| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2465 |
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| Symbol | |
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| ID | 3568086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2664530 |
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| End bp | 2667421 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637680933 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_285670 |
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| Protein GI | 71908083 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.421372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.628025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTGA ATCTTCCCCT TTCAGCCCTG GAGCAGCACG ACGAGTTCAT CGGCCGCCAC
ATCGGCCCAT GCTCGACCGA AATGGCTACC ATGCTGACCG CCATCGGTGC CGACAGCCTG
GAGCAGCTGA TCGACCAGAC CGTTCCCGCC GCCATCCGTT TGCCGGCTGA TCTGCCGCTG
CCCGCCCCGC GCCGCGAACA CGAAGCGCTG GCCGACCTCA AGGCCATGGC CAGCAAGAAT
GTCGTCAACA AGTCCTGCAT CGGCATGGGC TATTACGACA CACTGACGCC CAAGGTCATC
CTGCGCAACG TCATGGAAAA CCCGGGCTGG TATACGGCCT ACACGCCCTA CCAGGCTGAA
ATCGCCCAGG GCCGCCTGGA AGCGCTGATG AACTTCCAGC AAATGGTCAT CGACCTGACC
GGACTGGAAA TCGCCAACGC CTCACTGCTC GACGAAGCCA CCGCCGCCGC TGAAGCGATG
ACCATGGCGC GCCGTGTTTC GAAGTCGAAA TCCAACCGTT TCCTGGTCGA TGCCAACTGT
TTCCCGCAGA GTATCGACGT GGTCAAGACC CGCGCCGCCT ATTTCGGCTT CGAGTTGGTC
ATCGGCAACA TCGACGCGCA CAAGGACGGT GACTTCTTCG GCGCCCTGCT CCAGTACCCG
GGCGACAACG GCGAAGTCCG TGACCTGACC GACGTGATCG CCGGCCTGAA GGCCAAGGGC
ACGACCGTTG CTGTCGCCTC CGACCTGATG GCACTGGTGC TACTCAAATC CCCCGGTGCC
ATGGGTGCCG ACATCGCGCT TGGCTCCAGC CAGCGCTTCG GCATTCCGAT GGGCTTCGGC
GGGCCGCATG CTGCCTTCTT CGCCACCCGC GAAGCCTTCG TTCGCTCGAT GCCCGGCCGC
ATCATCGGCA TCTCCAAGGA TGCGCGCGGC AACACCGCTT ACCGCATGGC ATTGCAGACT
CGCGAACAGC ACATCCGCCG CGAAAAGGCC AACTCCAACA TCTGTACCTC GCAGGTACTG
CTCGCCAACA TGGCCGGCAT GTACGTGGTC TATCATGGCG CCGAAGGTCT GCGTACCATC
GCCGGTCGCA TCCACCGCCT GACCGCGATC CTGGCCGAAG GCCTCAAGCG TGCCAGCGTC
AATCTGCTGA CCAAGCAGTT CTACGATACC GTGCATTTTG ATCTTGGCGC CCGCGCCGAA
TCGGTTTACA ACGACGCGCT CGCCGCCGGT TACAACCTGC GCCGCGTCTC GGCCGGTGTG
CTTGGTATTT CCTTCGACGA AACCACCACG CGAGACGATG TCGCCACCCT GTTCAAGCTG
ATCGCCCAAA CCACGCTCGA CGTTGCTACC ATCGATGCGC AAGTCGCCGC AGCCGACTCC
GCTCTGCCCG ACAGCCTGAT CCGCAGCGAT GCCGTGCTGC AGCACCCGGT GTTCAACACG
CACCACACCG AGCACGAGAT GCTGCGCTAC CTGAAGTCGC TGCAGAACAA GGACCTGGCG
CTCGACCACT CGATGATCTC GCTCGGCTCC TGCACCATGA AGCTGAACGC GACCAGCGAG
ATGATCCCGG TCACTTGGCC GGAATTCGGC GGGATACACC CGTTCGCGCC GCGCGATCAG
GCCGTTGGCT ATCTGGAAAT GATCACCAGC CTGACCGAGT GGCTGAAGAC CGTCACCGGC
TTCGACGCCA TCTGCATGCA GCCGAACTCC GGGGCGCAGG GTGAATACGC CGGTCTGGTC
GCTATCGACC GTTTCCACGC CAGCCGTGGT GAAGAGCACC GCAACGTCTG CCTGATTCCC
AAATCGGCCC ACGGCACCAA CCCGGCCACC GCCCAGATGG CCAACATGAA GGTGGTGGTT
GTCGATTGTG ACGAGAACGG CAATGTCGAT GTCGCCGATC TCAAGGCCAA GGCCGAAGAG
CACAAGGACG ACCTGGCCTG CCTGATGATC ACTTACCCGT CGACGCACGG CGTGTTCGAG
GAAGCCATTC GCGACATCTG CGCCATCGTG CATGCCAACG GCGGCCAGGT GTATATGGAC
GGTGCCAACC TCAACGCCCA GGTCGGCCTG ACCTCGCCCG GCTTCATCGG CGCCGATGTC
AGCCACATGA ACCTGCACAA GACCTTCGCC ATCCCGCACG GCGGCGGTGG ACCGGGCATG
GGCCCGATCG GCCTCAAGGC TCACTTGGCA CCGTTCATGG CCGACCACGT TGTCCAGCCA
ACCGGCGACG CCAACCGCGT CAACGCCGGC CAGGGAGCAG TCTCCGCAGC GCCTTTCGGC
TCGGCCTCGA TCCTGACCAT TTCGTGGATG TACCTGGCCA TGTTGGGCGG CGCCGGCGTC
AAGAAGGCGA CGCAGGTTGC CATCCTCAAC GCCAACTACG TCGCCAAGCA GCTCAACGCG
CACTACCCGG TGCTCTACGT CGGCAAGAAC GGCCGCGTGG CGCACGAGTG CATTCTCGAC
ATCCGCCCGA TCAAGGCCGC TACCGGCATC GCCGAGATCG ACATCGCCAA GCGCCTGATG
GACTACGGTT TCCATGCGCC GACGGTCTCC TTCCCGGTCG CTGGCACGAT CATGGTCGAG
CCGACGGAAT CCGAATCGAA GGCCGAACTG GATCGCTTCA TCGGCGCCAT GATCGCCATC
CGTGAGGAAA TCCGCCAGAT CGAAAATGGC GTTTGGACGG CCGACAACAA TCCGTTGAAG
AATGCCCCGC ATTCGCAGGC GGACGTCATG GATGCCGAAT GGAAGCATCC GTACAGCCGT
CAGCAGGCCG TCTTCCCGCT GCCTTGGGTG GCGGCCAACA AGTTCTGGCC GAGCGTCAAT
CGCATCGACG ATGTGTATGG CGATCGCAAC CTGAACTGCG CCTGCCCGCC GATGGAAGCC
TACGCCGACT GA
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| Protein sequence | MPLNLPLSAL EQHDEFIGRH IGPCSTEMAT MLTAIGADSL EQLIDQTVPA AIRLPADLPL
PAPRREHEAL ADLKAMASKN VVNKSCIGMG YYDTLTPKVI LRNVMENPGW YTAYTPYQAE
IAQGRLEALM NFQQMVIDLT GLEIANASLL DEATAAAEAM TMARRVSKSK SNRFLVDANC
FPQSIDVVKT RAAYFGFELV IGNIDAHKDG DFFGALLQYP GDNGEVRDLT DVIAGLKAKG
TTVAVASDLM ALVLLKSPGA MGADIALGSS QRFGIPMGFG GPHAAFFATR EAFVRSMPGR
IIGISKDARG NTAYRMALQT REQHIRREKA NSNICTSQVL LANMAGMYVV YHGAEGLRTI
AGRIHRLTAI LAEGLKRASV NLLTKQFYDT VHFDLGARAE SVYNDALAAG YNLRRVSAGV
LGISFDETTT RDDVATLFKL IAQTTLDVAT IDAQVAAADS ALPDSLIRSD AVLQHPVFNT
HHTEHEMLRY LKSLQNKDLA LDHSMISLGS CTMKLNATSE MIPVTWPEFG GIHPFAPRDQ
AVGYLEMITS LTEWLKTVTG FDAICMQPNS GAQGEYAGLV AIDRFHASRG EEHRNVCLIP
KSAHGTNPAT AQMANMKVVV VDCDENGNVD VADLKAKAEE HKDDLACLMI TYPSTHGVFE
EAIRDICAIV HANGGQVYMD GANLNAQVGL TSPGFIGADV SHMNLHKTFA IPHGGGGPGM
GPIGLKAHLA PFMADHVVQP TGDANRVNAG QGAVSAAPFG SASILTISWM YLAMLGGAGV
KKATQVAILN ANYVAKQLNA HYPVLYVGKN GRVAHECILD IRPIKAATGI AEIDIAKRLM
DYGFHAPTVS FPVAGTIMVE PTESESKAEL DRFIGAMIAI REEIRQIENG VWTADNNPLK
NAPHSQADVM DAEWKHPYSR QQAVFPLPWV AANKFWPSVN RIDDVYGDRN LNCACPPMEA
YAD
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