Gene Daro_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2460 
Symbol 
ID3568233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2660401 
End bp2661054 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content57% 
IMG OID637680928 
Productpeptidase M50 
Protein accessionYP_285665 
Protein GI71908078 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value0.754633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAA GCCTGATCCA GACCCTCGCC ATATCGGCTC TGCCGGTGAT TTTTGCAATC 
ACGCTGCACG AAGCGGCACA CGGCTATGCG GCACGACATT TCGGCGATCC GACCGCCTGG
ATGCAGGGGC GCATCAGCCT GAATCCGCTG CGCCACATCG ATCTGGTCGG CACCATTATC
ATCCCGATTA CTATCCTGCT CTTTTCGGGT GGTACCTTCC TGTTCGGCTA CGCCAAGCCG
GTACCAGTCG ATTTCAGTCG CCTGCGCAAA CCCAAACAGG ACATGTTCTG GGTGGCTGCC
GCCGGTCCTG GAGCCAACCT TTTCATGGCT TTCGTCTGGG CTGCCTTGCT CAAGCTGGCC
TGGCTGCTGC CAAGCAGCGA ATACACGCTG CCGCTCTCCG AAATGAGCAA GATCGGCATC
ATGGTCAATT GCGTGCTGAT GGTGCTCAAT CTGCTGCCCC TGCCGCCGCT TGATGGTGGC
CGCATCGCGG TCAGCCTGCT ACCGCATCAG CTGGCATGGA AGTTTGCCCA GCTCGAACGC
TGGGGTTTTC CGATTTTGCT GCTCCTGTTA TTCACCGGTA TCCTCGGTGC TGTCATGAAC
CCGCTGGTTG TTTTGTCAGC CCGGGCGATC GAGTTAATTT TTGGTCTTTA CTAA
 
Protein sequence
MLESLIQTLA ISALPVIFAI TLHEAAHGYA ARHFGDPTAW MQGRISLNPL RHIDLVGTII 
IPITILLFSG GTFLFGYAKP VPVDFSRLRK PKQDMFWVAA AGPGANLFMA FVWAALLKLA
WLLPSSEYTL PLSEMSKIGI MVNCVLMVLN LLPLPPLDGG RIAVSLLPHQ LAWKFAQLER
WGFPILLLLL FTGILGAVMN PLVVLSARAI ELIFGLY