| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2455 |
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| Symbol | |
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| ID | 3568228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2656524 |
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| End bp | 2657546 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637680923 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_285660 |
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| Protein GI | 71908073 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 0.155456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA AACGCACACC ATTCCGTCAA TCGTCGAACA AATCCGAGGG GGCTGCCGAG
CGCCGACCGG AAGATGCAGG TCCACGTGTC GGCGCACCGT CGCGTGGACG CGCGGCCGCG
CAGCGTGACC AGGTGCCAGG CGATGCTCAG GGGGCGAAAC CTGCGCCGCG CAGAAAGCCG
GCACCCAATA CCGGCGGAAG AGCCAATCGT GGTAGCGTCG CCCGCGACGG ACGGCCGCTT
GCTGAGGCCA AGCCAGTGCG TTTGCAGAAG GTGCTGGCCG AGGCTGGTGT CGGTTCGCGT
CGCGAAATGG AAGAGTGGAT TGCTGCAGGC AAGGTCAGCG TCAATGGCGT CGTGGCGACT
GTAGGGCAAT CGGTTGTGAA TTCCGACAAG GTCAAAATTG GTGGCCGCCT GATCAATATC
CGCTTTACGG GCAGTTCTCG TCCGCCGCGC GTCTTGATGT ATCACAAGCC GGAAGGCGAA
ATCGTTTCGC GCGACGACCC GGATGGTCGG CCGTCGGTGT TTGCTGCGCT GCCACGGATG
CGCGGTGGGC GGTGGATCAA TGTCGGTCGC CTCGACTTCA ATACCTCGGG TTTGCTGTTA
TTCACTACTT CTGGTGAGCT GGCCAACAAA CTGATGCATC CGAGTTCGGA ACTGGTTCGC
GAGTACGCCG TGCGTGTTCT TGGTGAACTG ACCCTGGATG CACAACAGAA GCTGTTGCAC
GGCGTCGAAC TGGAAGATGG TCGAGCGAAC TTTGGTTCGC TACACGACGG TGGTGGCGAG
GGGGCGAACC ACTGGTACCG AGTAACGATC TCCGAGGGGC GTAACCGTGA GGTCCGTCGC
ATGTTCGAGG CGGTCGGTTG CACGGTCAGC CGATTGATTC GCGTTCGCTA TGGCCCGTTC
ATCCTGCCGC CGCAACTGAA ACGAGGTATG GCCCGCGAGT TGAAAGAGGC GGAAATCAAA
ATGCTGATGC GAGAACTCGA AAACATGCCA TCGTCTCAGC GAAAAGGCCC TGAAGGCACG
TAA
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| Protein sequence | MKNKRTPFRQ SSNKSEGAAE RRPEDAGPRV GAPSRGRAAA QRDQVPGDAQ GAKPAPRRKP
APNTGGRANR GSVARDGRPL AEAKPVRLQK VLAEAGVGSR REMEEWIAAG KVSVNGVVAT
VGQSVVNSDK VKIGGRLINI RFTGSSRPPR VLMYHKPEGE IVSRDDPDGR PSVFAALPRM
RGGRWINVGR LDFNTSGLLL FTTSGELANK LMHPSSELVR EYAVRVLGEL TLDAQQKLLH
GVELEDGRAN FGSLHDGGGE GANHWYRVTI SEGRNREVRR MFEAVGCTVS RLIRVRYGPF
ILPPQLKRGM ARELKEAEIK MLMRELENMP SSQRKGPEGT
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