Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2453 |
Symbol | nusA |
ID | 3568226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 2654472 |
End bp | 2655944 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637680921 |
Product | transcription elongation factor NusA |
Protein accession | YP_285658 |
Protein GI | 71908071 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0000540151 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.905596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGTG AAATTTTGCT GCTGGTCGAT GCTCTGGCCC GCGAAAAAAA TGTCAGCAAG GAGATCGTCT TTGGCGCCCT TGAGCTGGCA CTCGCGTCAG CGACCAAAAA GCGCATCAAT GACGAGGCCG ATGTTCGTAT CTCAATCGAT CGCGACACTG GTAGCTTCGA ATCATTCCGT CGCTGGCAGG TTGTGCCGGA TAACGAATAC GTCAACGAAT TCCTCGAAAT TCCGTTGTCC GATGCCCAGA AGGATGATCC TGAAATCGAG CCCGGCGACT CTCTGGAAGA GCCGCTTGAG CCGATCGATT TTGGTCGTAT CGGTGCTCAG GCTGCCAAAC AGGTTATTTT GCAGAAGATC CGCGACGCCG AGCGCGAGCA GATTCTGGCT GACTTTCTTG GTCGCGGCGA GCATGTCGTT TCCGGTACCA TCAAGCGCAT GGAGCGTGGC AACGCCATTA TTGAGGCTGG TAAAATTGAA GCCATGCTGC CGCGCGACCA GATGATCCCC AAGGAAAATC TGCGTGTCGG CGACAGAGTT CGTGCCTATT TGCTGCGCAT TGATCGCAAT GCCCGTGGTC CGCAAATCAT CCTTTCGCGC ACCGCTCCGG AATTTGTCAT CAAGCTTTTT GACATGGAAG TGCCGGAAAT TTCCGATGGC CTGATGGAAC TCAAGGCCTG TGCCCGTGAC CCCGGTCTGC GCGCCAAAAT CGCTGTCAAG TCGAACGATC CCCGTGTTGA TCCAATCGGT ACCTGCGTCG GTTTGCGCGG TTCCCGGGTT ACCGCCGTTC GTAACGAAAT CGGTGGCGAG AATATCGACA TCGTGCTGTG GTCAGCCGAT CCGGCGCAAT TCGTTATCGG CGCGTTGTCG CCAGCTGAAG TGTCCTCCAT CGTGGTTGAT GAAGAAAAGC ACGCAATGGA TGTCGTGGTC GACGAGGATA ACCTTGCGAT CGCCATCGGT CGCAACGGGC AGAACGTTCG CCTGGCCTCC GAACTGACTG GCTGGACCAT CAATCTGATG ACGCAGGACG AGTCGGCCAA GAAATCCGAA GCCGAATTCG CCGAGACGCG CGTCGTCTTT ATGGAAAAGC TGGATATCGA TGAAGAACTT GCCGATCTGC TGATCGAGGA AGGGTTCTCG ACGCTGGAAG AAGTGGCCTA CGTGCCGCTG GCAGAAATGC TGGAAATCGA AGGTCTGGAT GAGGAAATCG TAAATGAGTT GCGTAATCGG GCTCGTAACG TCCTGCTCAC CGAGGCTATC GCAACTGAAG AAAAGCTGGA AAGTGTTTCC GAAGACCTGA TTGGTCTCGA AGGCATGAGC AAGGAACTGG CCGCCAAACT GGCTGGACAC GATGTCAAAA CCCGGGATGA TCTCGCGGAA TTGGCTGTTG ATGAATTGAC GGAAATGACC GGCATTGACG ATGAGCGTGC CAAGGATCTT ATCCTGAAGG CACGGGCTCA CTGGTTCGAG TGA
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Protein sequence | MSREILLLVD ALAREKNVSK EIVFGALELA LASATKKRIN DEADVRISID RDTGSFESFR RWQVVPDNEY VNEFLEIPLS DAQKDDPEIE PGDSLEEPLE PIDFGRIGAQ AAKQVILQKI RDAEREQILA DFLGRGEHVV SGTIKRMERG NAIIEAGKIE AMLPRDQMIP KENLRVGDRV RAYLLRIDRN ARGPQIILSR TAPEFVIKLF DMEVPEISDG LMELKACARD PGLRAKIAVK SNDPRVDPIG TCVGLRGSRV TAVRNEIGGE NIDIVLWSAD PAQFVIGALS PAEVSSIVVD EEKHAMDVVV DEDNLAIAIG RNGQNVRLAS ELTGWTINLM TQDESAKKSE AEFAETRVVF MEKLDIDEEL ADLLIEEGFS TLEEVAYVPL AEMLEIEGLD EEIVNELRNR ARNVLLTEAI ATEEKLESVS EDLIGLEGMS KELAAKLAGH DVKTRDDLAE LAVDELTEMT GIDDERAKDL ILKARAHWFE
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