Gene Daro_2440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2440 
Symbol 
ID3568383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2640871 
End bp2642151 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content52% 
IMG OID637680906 
ProductUDP-glucose/GDP-mannose dehydrogenase:6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_285645 
Protein GI71908058 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.406564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA TAGCAGTGGT GGGCTTGGGA TATGTTGGTT TGCCCTTGGC AGTGGAATTT 
GGCAAAAAAT ATCGGACGAT TGGATTTGAT CTCTCGACGC ACAAGATCGA ATGCTATAAA
AAGCACTACG ATCCCACGGG GGAAGTCAGT ACCGACGATC TAAAAGCAGC TACGTTGCTA
GAAGTTGGCA CAGATCCCGC GGCCATCCGT GAGGCTGACT TTGTTGTTGT TGCCGTGCCC
ACTCCTGTAG ATGATGCCCA TCAGCCTGAT TTCTCCCCAC TAGTCGGCTC ATCGACGGCT
GTTGGCCAAA ATCTAAAACA AGGTGCGATT GTCGTTTTTG AATCGACCGT TTACCCCGGT
GCCACCGAAG AAGTTTGTAT TCCAATTATC GAAAGAGAAT CCGGAAAAAC GTGGAAGAAA
GACTTTTTCG TTGGCTATTC GCCTGAGCGC ATCAATCCTG GCGATAAGGA AAGAACCGTC
ACCAAGATCA TCAAGATAGT CTCTGGTGAC ACCCCTGAGA CACTGGCCAC GGTACAGGAA
ATCTACGGCA GCATAATCAC GGCCGGTGTC TACCCAGCAT CGAACATCAA GGTTGCAGAA
GCCGCCAAGG TAATCGAGAA CACGCAGCGT GACCTGAATA TTGCGTTGAT GAACGAACTG
GCGATCATAT TTGACAAGAT AGGCATCGAC ACACTGGAGG TCTTGCAAGC GGCCGGTACA
AAGTGGAATT TCCTTCCCTT CCGCCCGGGC CTGGTCGGTG GGCACTGTAT TGGCGTTGAC
CCGTACTACC TGACCCACAA GGCACAAAAG CTGGGCTATC ACCCGGAGGT CATTCTTGCC
GGCCGCCGTA TCAATGACGG AATGGGGAAG TTCATCGCCG AGCAAACGAT CAAGATGCTC
GTCAAGGCAG GGCACCCGGT CAAGGATTGC CCAATTATTG TGCTGGGCCT TACCTTCAAG
GAAGACTGTC CCGACCTACG CAACTCAAGA GTCATCGATG TCATTCGGGA ACTGGAATCC
TACGGCGCCA AGGTGGTAGT TCACGACCCA GTTGCCGATG CAGCCGAGGC GCGTCACGAA
TATGGCGTCG ATCTAGTTGC CTGGAACGAT CTGCCAAAGG CAGCAGCCAT TGTCGCAGCC
GTCAATCACA AGGAATACAA AGCCCTTCCA ATTGGCGACT TTCTGGCTAG ACTGGAAAAA
GATGGCGTAA TCGCCGACGT CAAGAGCATG CTTGATAGCA AGGCCTTTTC GGAAAACGGT
ATTACTGTTT GGCGACTATA A
 
Protein sequence
MTTIAVVGLG YVGLPLAVEF GKKYRTIGFD LSTHKIECYK KHYDPTGEVS TDDLKAATLL 
EVGTDPAAIR EADFVVVAVP TPVDDAHQPD FSPLVGSSTA VGQNLKQGAI VVFESTVYPG
ATEEVCIPII ERESGKTWKK DFFVGYSPER INPGDKERTV TKIIKIVSGD TPETLATVQE
IYGSIITAGV YPASNIKVAE AAKVIENTQR DLNIALMNEL AIIFDKIGID TLEVLQAAGT
KWNFLPFRPG LVGGHCIGVD PYYLTHKAQK LGYHPEVILA GRRINDGMGK FIAEQTIKML
VKAGHPVKDC PIIVLGLTFK EDCPDLRNSR VIDVIRELES YGAKVVVHDP VADAAEARHE
YGVDLVAWND LPKAAAIVAA VNHKEYKALP IGDFLARLEK DGVIADVKSM LDSKAFSENG
ITVWRL