| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2434 |
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| Symbol | |
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| ID | 3568377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2629888 |
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| End bp | 2631549 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637680900 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_285639 |
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| Protein GI | 71908052 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR03098] acyl-CoA ligase (AMP-forming), exosortase system type 1 associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCGA CTGTGAGATA CTACATATCG TCATACTCAA CCCACATGCA AGACTCAGTC
CCCATGAGAG ATTCCACACT TCTTCACGAA CTGATTTTCT GTGCAGCGCA GCGCGATGCT
ACGGCACCTG CGCTGACCTA CGGCAAGTCC ACCCTGAATT ACGGTGACCT GCAGAGCGCA
ATCAATCACT TTGCCGGCGG CCTCATAAAT CTAGGTCTTC AGCGCGGCGA GCGAGTCGGC
ATTTATCTCG AAAAACGCTT CGAGACCGTT ATTTCCAGCT TTGGTGCCCC CGCTGCAGGT
GGCGTTTTTG TGCCGCTGAA TCCCTTACTC AAACCAGAGC AAGTGGGCTA CATCTTGCGC
GATTGCAATG TCCGCATTTT GGTCACATCG CAGGAACGCT TCGCTCAGTT GCAAGATACT
CTTGCCGCTT GCCATGATCT TCGCCATGTC GTGGTACTTG ATTCTGCTGA GCCACTTCCA
GTAATCAATG GTCTGAACAC GATTCGCTGG AGTACCCTGC TCGCAAATCC TCCGGCAAGA
GGCCATCGTG TAATAGATAC CGACGTGTTG GGTATTTTGT ACACATCCGG CAGCACAGGC
AAACCCAAAG GAGTTGTGCT TTCGCACCGC AACATGGTGG CTGGTGCAAA AAGTGTCGCC
AGCTATCTGG AAAACCGGGC CGACGACACA CTACTGGCCG CCCTCCCCCT CTCGTTCGAT
GCCGGCTTCA GCCAGCTAAC CACAGCTTTT CATGTTGGCG CTCGGGTTGT GCTTCTCAAT
TACCTTTTGC CGCGAGATGT ACTCAAGACC ATCGAACGCG AAAAGGTAAC CGGGCTGACG
GCGGTTCCGC CGCTGTATAT CCAGCTGACA CAACTCCAGT GGCCTGAATC GATCACCGAT
CACCTGCGGT ATTTCGCCAA TACCGGTGGT CGAATGCCGC GTGAAACGCT GGATTCACTG
CGGCAGCACT TGCCCAAAAC CAAACCGTTT CTGATGTATG GCCTGACAGA GGCCTTCCGT
TCAACCTTCC TGCCACCTAG TGAAGTAGAC AAGCGGCCGG ACTCGATCGG CAAAGCAATC
CCCAATGCCG AAATTCTGGT TTTGCGCGAA GATGGCACAC CATGTGCACC AAACGAACCT
GGTGAATTGG TACATCGAGG AGCGCTGGTC GGCATGGGTT ACTGGAACGA TATAGAAAAG
ACAGCCGAGC GCTACAAACC GCTGCCCGTC CATGCTCCTG GCCGCGAGGC CGGTCTTGTG
TTGCCCGAAA TCGCTGTCTT TTCCGGCGAT ACCGTACGCA TGGACGAAGA AGGATTCCTG
TATTTTATCG GCCGCCGTGA CGAGATGATG AAAACCTCCG GTTACCGGGT CAGCCCAACC
GAGGTTGAGG AAATTCTCTA CGCAACCAAG ATGGTTGGAG AATGCGTTGC CTTTGGCGTA
GACAATGACC GACTCGGCCA AGCCATTCAG GTTATTGCCA CCGCCCCCCC CAATGGCACA
CTCGACACTG CCGCGCTCCT TGCCGAATGC CGTGCTCGTA TGCCTGCGTA CATGGTACCA
AGCGGCATAG AAATCCAGGA TGGCCCGCTA CCACGCAATC CGAATGGCAA GATTGACCGA
AAAACCCTTT CTACAGCATG GATCGAAGCT CATGGAAGCT AA
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| Protein sequence | MISTVRYYIS SYSTHMQDSV PMRDSTLLHE LIFCAAQRDA TAPALTYGKS TLNYGDLQSA
INHFAGGLIN LGLQRGERVG IYLEKRFETV ISSFGAPAAG GVFVPLNPLL KPEQVGYILR
DCNVRILVTS QERFAQLQDT LAACHDLRHV VVLDSAEPLP VINGLNTIRW STLLANPPAR
GHRVIDTDVL GILYTSGSTG KPKGVVLSHR NMVAGAKSVA SYLENRADDT LLAALPLSFD
AGFSQLTTAF HVGARVVLLN YLLPRDVLKT IEREKVTGLT AVPPLYIQLT QLQWPESITD
HLRYFANTGG RMPRETLDSL RQHLPKTKPF LMYGLTEAFR STFLPPSEVD KRPDSIGKAI
PNAEILVLRE DGTPCAPNEP GELVHRGALV GMGYWNDIEK TAERYKPLPV HAPGREAGLV
LPEIAVFSGD TVRMDEEGFL YFIGRRDEMM KTSGYRVSPT EVEEILYATK MVGECVAFGV
DNDRLGQAIQ VIATAPPNGT LDTAALLAEC RARMPAYMVP SGIEIQDGPL PRNPNGKIDR
KTLSTAWIEA HGS
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