Gene Daro_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2417 
Symbol 
ID3568073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2609600 
End bp2610382 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content54% 
IMG OID637680884 
Producthypothetical protein 
Protein accessionYP_285623 
Protein GI71908036 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value0.320398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAA AAGAATTCGA AGCCTTAGCA GCAGCCGTTG CCAACCCAGA TTACATCACC 
TGGAACAAGG AGCGCATATT CACATCAGTC GAAGCCTTAC AGCGTTTCTT GAACCTGAAA
GGTCTGAAGA CGCTCGATCT CGGGCATGAC ACCTTCGTCG GCCTGTTGCT AGCCCGGGCA
GGAGCCGAAC TTGTTGGCAA TGTAGCACCT GTTCAGGACT CGACCATCAA ACCCGATCAG
CCGCGTTTCG AGCTTCCCGG GGGGCAAGCC TATGAGTGGA CAACCGATGC CTTCGACTTC
GAGACCACCT TTCCCTATCA TCCGGGTGCG TTCGACCTTG TCACAGCATT CGAGGTCGTC
GAGCATGTCG TTGGCAGCCC CAGACAATTC ATCCGGGAAA TCAAGCGCGT TCTGAAACCC
GGGGGATATC TCTTCTTCGG GACGCCGAAT GTCAATGCTT GGGCAAAGAT GATGCGCCAG
TTCCAGCAAG CACCTCTGTA TGACTCCAAA CCCTACAGTC AGGATTTCGG GCCTCGACAT
TTCATGTGCC ACGTTTACGA GTATTCCCCC TGGGAATTAA AAACGCTGCT TAAGTCGGAA
GGCTTCGAAA TCGTCAGCTT CCGGACTTGG GACCCCTATC CGTCCGATCC GAGGGGCCTA
CGCAACGGAA TACTGCGCTT GCTCTTTGCC GCAAGTCTTT TCAGTTGTGG TTACTTCAAG
GAAGCCCTGT TGCTTTTCAG GGAGCGCGGC CATCAAATTG GCCTGCTCGC CCGCTCAGTA
TAA
 
Protein sequence
MDRKEFEALA AAVANPDYIT WNKERIFTSV EALQRFLNLK GLKTLDLGHD TFVGLLLARA 
GAELVGNVAP VQDSTIKPDQ PRFELPGGQA YEWTTDAFDF ETTFPYHPGA FDLVTAFEVV
EHVVGSPRQF IREIKRVLKP GGYLFFGTPN VNAWAKMMRQ FQQAPLYDSK PYSQDFGPRH
FMCHVYEYSP WELKTLLKSE GFEIVSFRTW DPYPSDPRGL RNGILRLLFA ASLFSCGYFK
EALLLFRERG HQIGLLARSV