Gene Daro_2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2405 
Symbol 
ID3567589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2593147 
End bp2594367 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content54% 
IMG OID637680872 
Productglycosyl transferase, group 1 
Protein accessionYP_285611 
Protein GI71908024 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID[TIGR03087] sugar transferase, PEP-CTERM/EpsH1 system associated 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACA TTCTCTACCT CGTCCACCGA CTGCCATATC CGCCGAACAA AGGCGACAAG 
GTACGTTCGT TCCACCTGCT TAAACACTTG GTCAAAGAGC ACAAGGTCTT CCTCGGAACC
TTCGTTGATG ATCCGGAAGA CGAGGTGCAT ATTGAAACCG TACGAGGCCT TTGCACTGAA
TTGTATGTCG CCCGCCTTGA TCCACGTTTC GCCAAGATTC GCAGCCTCAA TGGCCTGCTT
GCCGGCGAAC CTTTGACTCT TCGCTACTAT CGTGATGCTG GCTTACAGGC ATGGGTGGAC
AACATCTGCA AGCATCACCA GATTGATGCG ATCGTGATCT TTAGTTCAGC GATGGCGCAA
TACATCGAAG ACAAACGACG AGTGCCGGTA TTGATCGACT TTGTCGACGT TGATTCGGCC
AAATGGACTC AGTATGCCGA TAAGCATCGC TGGCCCATGT CCTGGATTTA TCGTCGTGAA
GGCGAGTTAC TGCTTGCCTA CGAACGACTG ATGGCCTCCT TGGCAATCCG ATCTTTTTTT
GTCACCGACG CAGAAGTCGC CCTGTTCAAG CGACTTGCAC CAGAATGTGG CGTCCGTATC
GATGCGATGT GCAATGGCGT AGATGCCGAC TTCTTCTCGC CCGATCCTGA GCGACCAAAC
CCGTTTGGCG ATAAAGAAAC TCCTGTTGTA TTCACCGGTG CAATGGACTA CTGGCCGAAC
ATTGACGCTG CCATTTGGTT TGTGAACGAA ATATTGCCAA GAGTGAGGCA GCAGCGTCCT
GAAGTTCGCT TCTATATCGT TGGCCGTAGC CCCACCCCTG AAGTACTTGC GCTGGCAAAT
GAGCATGTCG TTGTGACGGG AACCGTTCCA GACGTCCGCC CCTATTTGCA ACACGCGAGT
ATCGTCGTCG CCCCGCTACG CGTCGCGAGA GGCATCCAAA ACAAGATTCT GGAGGCCATG
GCCATGGGAC GCCCCGTCAT TGCCACGACA GAATGTGCCG CTGCGGTCGA CGCCAAAATC
GATGCAGAAT TGCTCGCAGC AGCAACAGCC AGCGAGTTCA TTGCTGCGAT CGACAAGCAA
CTGGCGAACC CGACGATCGG CAACGCCATC GGTCAGGCAG CCCGCACACG GGTCGTGGGC
CGATACAGCT GGGAGGCACA CCTGAGCGGT ATCAACCCCT ATCTCCATTT CCCTGAACAG
CCAGAATTGA CATGTTCCTA G
 
Protein sequence
MANILYLVHR LPYPPNKGDK VRSFHLLKHL VKEHKVFLGT FVDDPEDEVH IETVRGLCTE 
LYVARLDPRF AKIRSLNGLL AGEPLTLRYY RDAGLQAWVD NICKHHQIDA IVIFSSAMAQ
YIEDKRRVPV LIDFVDVDSA KWTQYADKHR WPMSWIYRRE GELLLAYERL MASLAIRSFF
VTDAEVALFK RLAPECGVRI DAMCNGVDAD FFSPDPERPN PFGDKETPVV FTGAMDYWPN
IDAAIWFVNE ILPRVRQQRP EVRFYIVGRS PTPEVLALAN EHVVVTGTVP DVRPYLQHAS
IVVAPLRVAR GIQNKILEAM AMGRPVIATT ECAAAVDAKI DAELLAAATA SEFIAAIDKQ
LANPTIGNAI GQAARTRVVG RYSWEAHLSG INPYLHFPEQ PELTCS