Gene Daro_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2399 
Symbol 
ID3567583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2586482 
End bp2587453 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content54% 
IMG OID637680866 
Productexopolysaccharide biosynthesis protein 
Protein accessionYP_285605 
Protein GI71908018 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family
[TIGR03018] exopolysaccharide/PEPCTERM locus tyrosine autokinase 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.169574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGA TTGAACAAGC TGCCAAGCGT TTAGAGCAAC TGCGCCAAGC TGGGGTCGAG 
CTCCCCAATA GCGAACCGGA ACAGGGGTTG GAGTTATCAG CTTCCAATTC GCCCCAAAAA
CGAGAAGCAG TTGCGCCTGC GATAGCACCA AACCGCCACC AAGCAACTCA GCCCCCCCGC
TCGCCGACAC TCGACGCTGA AAAGGCTTCA TCCAATTCAG GGAATCGCGT TGAATTGAAC
CTTGAGGCCA TCTCTGCGTC CGGCTTGCTG GTACCTAATG CGGCCCGCAG CGAACTGGCT
GACGAATATC GTGTGATCAA ACGTCCCTTA ATCGCCAACG CAATGGGCCG CAGTGGTGCG
CAGATCGATT ACGGCAATTT GATCATGGTG ACAAGCGCGC TTCCCGGTGA GGGGAAGAGT
TTTTCTGCTA TCAACCTCGC CATCAGTATT GCCATGGAAC TCGACAACAC GGTCATGCTG
GTCGATGCTG ATGTTGCACG TCCATCAATA CTCAATATGC TGGGGCTTTC CCCTGCTCCA
GGCCTGCTGG ATGTGGTTGA CCGTAGCTCG GTAGATATTT CCGGTGTTCT GCTACGCACT
AACATCGACA AGCTATCCAT TCTGCCGAGC GGGACCCAAC ATCCAAGAGC AACTGAGTTG
CTCGCAAGTG ATGCAATGAT CAAACTCCTT GATGATATGT CAAGGCGCTA CAGCGATCGG
ATCATCATAT TCGACTCCCC TCCCCTGTTG TTAACGACCG AAGCGCGAGC ATTGGCAACC
CACATGGGGC AGATTGTCAT TGTGGTCAAT GCCGAGAACA CAACTCAAGC GGCGGTCAAA
GAGGCGATCG CCACCATTGA GGCTTGTCCA GTCAAGATGA TGCTCCTCAA TCAGGCGCGT
CAGGCAGGAT CCGGCACATA CGGCTACGGT TATGGCTATG GGTACGGAAA CAGGTACGGA
AATGAGAAAT AA
 
Protein sequence
MSLIEQAAKR LEQLRQAGVE LPNSEPEQGL ELSASNSPQK REAVAPAIAP NRHQATQPPR 
SPTLDAEKAS SNSGNRVELN LEAISASGLL VPNAARSELA DEYRVIKRPL IANAMGRSGA
QIDYGNLIMV TSALPGEGKS FSAINLAISI AMELDNTVML VDADVARPSI LNMLGLSPAP
GLLDVVDRSS VDISGVLLRT NIDKLSILPS GTQHPRATEL LASDAMIKLL DDMSRRYSDR
IIIFDSPPLL LTTEARALAT HMGQIVIVVN AENTTQAAVK EAIATIEACP VKMMLLNQAR
QAGSGTYGYG YGYGYGNRYG NEK