Gene Daro_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2380 
Symbol 
ID3568594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2565708 
End bp2566571 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content61% 
IMG OID637680847 
Productnicotinate-nucleotide pyrophosphorylase [carboxylating] 
Protein accessionYP_285586 
Protein GI71907999 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG AATTCGATTA CCCACTCGCT GCCGAGATTT CCCGCAACGT GGATGCCGCC 
CTGAGCGAAG ACGTCGGGGC CGGCGATCTG ACAGCCACTC TTGTTCCCGC TGAACGCCAG
GTCAGAGCCA CCGTCATCTC CCGCGAAGCC GGCGTCCTGT GCGGTACCGC CTGGTTTGCC
GAATGTGTCG CCCGCCTTGA TCCGACCGCC CGCATCACGT GGCACGGCGC CGATGGCGAC
CGGATTGCTC CCAACCAGTT GCTATGCGAA ATCGACGGCA ACGGCCGCGC CCTGCTCACC
GCCGAAAGGA GTGCATTGAA TTTCCTGCAA CTGCTCTCGG CCGTGGCCAG CAAGGCTCGC
GTCTACGCCG ATGCCATCAC CGGCACCAAG GCACAGGTCG TCGATACCCG CAAAACCCTC
CCAGGCCTGC GCATTGCGCA AAAATACGCC GTCCGGGCGG GTGGCGGTGG CAACCATCGC
CTAGCGCTCT GGGATGCCAT CCTGATCAAG GAAAACCACA TTCATGCAGC CGGCGGCATC
GCCCAGGCAA TGGCCGCAGC CAAGCAGGTG GCCGAGCAGG CAAAAGGTCG TTGCAAGTTT
ATCCAGATCG AAGTCGAAAG CATCGACGAA CTGAATCAGG CCCTGACTGC TGGTGCCACG
ATGATTCTGC TCGACAACTT CAGCCTCGAC ATGATGCGCG AGGCTGCTCA AATCAACGCC
GGCCGTGCCA TTCTGGAAGC ATCGGGAAAT GTCACCCTGG AAACCATTCG CGGCATTGCC
GAAACCGGGG TCGATAGAAT CTCGGTCGGC GCGCTGACCA AGGACGTCAA GGCGCTCGAC
CTGTCGATGC GCTTCGTTGG CTAG
 
Protein sequence
MTIEFDYPLA AEISRNVDAA LSEDVGAGDL TATLVPAERQ VRATVISREA GVLCGTAWFA 
ECVARLDPTA RITWHGADGD RIAPNQLLCE IDGNGRALLT AERSALNFLQ LLSAVASKAR
VYADAITGTK AQVVDTRKTL PGLRIAQKYA VRAGGGGNHR LALWDAILIK ENHIHAAGGI
AQAMAAAKQV AEQAKGRCKF IQIEVESIDE LNQALTAGAT MILLDNFSLD MMREAAQINA
GRAILEASGN VTLETIRGIA ETGVDRISVG ALTKDVKALD LSMRFVG