| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2378 |
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| Symbol | |
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| ID | 3568592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2561443 |
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| End bp | 2564148 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637680845 |
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| Product | PAS |
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| Protein accession | YP_285584 |
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| Protein GI | 71907997 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.756345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.766649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGCC TGTTCAACTG GCGTTCGCTT CAGACTCGGA TTGCGGTCGG CACATTGATC
GTGGTGCTGG GGATACTCTG GACAACGGTC ATTGCGCTCG GCCAGTTATT GCATCGCGAT
ATGGAGGAAT CCATTTCGGC ACAGCAATTT TCAACGGTTT CGCTGATCGC CAATGAAATT
GACCGTTCCA TCCTTGAACG CCAGAGCATC GCCGAATCTG TCGCCAGCAG CCTTACCGCC
ACCATCCTTG CCTCCCCTGC AGCCACGCAG CGCCTCGTGG AAGAACGCAA GATTCCACAG
CGGATTTTCA ACTGGGGGAT CATTGTCACC GACAGCCAGG GCACTGCCAT TGCCAGTACG
CCGCTTGAAC TGGATCGCAA AGGTACGAAC TACGCCAATT ATGATTTCAT CTCGAAAGCC
CTGAGCACGG GCATTCCGCA GATCGCCGAT CCTGTTTTCA GCCCGAACAG CGGTTTGCCG
GTCTTCACGA TAGTTGTTCC CATTCAGAAT CCGGCCGGCA AGACCATAGG CCTGGTCATC
GGCGTCACCA ATCTCGCCCT GCCCAACTTT CTTGACGAAA TCGGCTCCGC CAAATACGGC
AACACGGGTG ACTTTCTCAT CACCGCTCCG GCCAAGCGGC TCTTTGTGGC CTCCTCGGAC
AAGCGACGCG TCATGAAGGC CGGGCCACCA CCCGGCCTTA ACCCGGTCTA TGACCGCTAT
ATCGGCGGCT ACGAAGGCTC AGGCGTGGCC ATGAGCTCCC GCGGCGTTGT CGAACTATCT
TCAAATAAAC GAATCGCCAG CACCGGCTGG TTGATGCAAG CCGTACTCCC GACAGACGAG
GCTTTCGCAC CGATCCATGC CATGGAGCGC CACCTGATCG TCATTTCGCT GATCTTGACG
CTCATCGCGA CTTTCGCCAG TTGGTGGTGG CTGCGCCTGC AATTCCGCCC CCTCTCCGAA
ATATCCTCCT TGCTGCGCCA GATGCGGGAT GGCGAAATCC CCAGGCAGGC ACTGCCAGTA
ATACGGCAGG ATGAAATCGG ATTGTTGACT GAAGCGCTGA ACGGCCTGCA GGAAGTCATC
GTCACCGAAG AAGCGATGGC CGCCGAACAT GCCGCCAATA ACCGCTTGCG GCACATCGTT
TCCTACATAC CAGGCATCGT CTTTCAATAC CGCCTCTTTC CGGATGGCCA TAGCGCCTTC
CCCTTTGCCA GCGACGGCAT CCGGGAAATC TACGGTTTGG CCCCCGATCA AGTCGAGAAC
GACGTCCGCC CACTAAGCGA CATGATGCAC CCGGATGATG CAGAACACTT TCTGGCAACG
ATGCACGAGT CGGCAAAAAC GCTTTCTCCA TGGCACGTCG ATTACCGCAT CTGCCTGCCG
GATGGCAAAA CCAAGTGGTT GATGATCAAC GCTCAACCAG AGAGCAGCAA GGATGGCAGC
ACGCTCTGGC ACGGTTTTAT TGCCGACATC TCTGAAATGA AGGCCATGTC GGCCGAACTT
GAACACTATC GCGACCACCT CGAACAACTG GTCAAGGTCA GAACCGCCGA CCTTGAAGCC
TCTCGTGCCG AAGCCGAGCG GCTGGCCCTG GCCAAGAGCG AATTCCTGGC CAAGATGAGC
CACGAAATCC GCACTCCCTT GCATGGTGTG CTCGGCATGG CCCATATTGG TGGCCGTAAC
ACGAGCGAAG GCAGCAAGGC ACATGAAGCA TTTGCCAAGA TCACCCACTC TGGCAACCTC
CTGCTTGGCA TCATCAATGA CATTCTCGAT TTTTCGAAAA TGGAAGCCGG CATGCTCAAG
ATCGAATCGA CCGATATCGA TTTGCCGGCT ATCCTCGCCG AGTCGATGGA GTTGATGCAG
GAACGTGCGA ATGCCAAAAA ACTGTCCTTG CAACTCCGGG TGGCAGAAAA CCTGCCGGCC
CACTGCCAAA GCGACTCACT ACGCCTGCGC CAGATACTCC TGAACCTGCT TTCCAATGCC
GTGAAATTTA CCGTGAGCGG CTCGGTAACG CTCGATGCCT CTTTTGACGG TCATCAACTC
ATCTTCAAGG TCAGCGATAC CGGAATTGGC ATCACCCACG AACAATCCAG CAAAATATTC
AACCCCTTCG AGCAAGGTGA CAATTCAACC ACCCGCCGTT TCGGCGGCAC CGGTCTCGGG
CTGGCCATCA CCTCGCATCT GGTCAAATTG ATGGAGGGCA CTATCCATCT CGAAAGCACC
CCGGATAACG GCAGCCGCTT TGAAATCCGA CTTCCCTACC ACCCCATCGT TGCGGAGTCC
GCCGCAATTC CACTGGCAGC CCCGGCCTTG GCAGCCAAGC CACTGTCCGG ACTACGCATC
CTGGTGGCTG AAGATATTGA TATCAACCAG GAAATCATGG AGGCCATACT GCATGACTTC
GGCGCCGAGG TCAGCATGGT CAGCAACGGC CTGGAAGCCG TCCAAAAAAT TCAGCAGCAT
GGCGATAGCG GCTTCGACGT GGTGCTGATG GATATCCAGA TGCCGGTCAT GAATGGCCAT
GACGCCACAC GTCAAATATT GCGCATCGCT CCCGGTTTGC CGATCATCGG GCAAACTGCC
CACGCGCTGA CCGAAGAAAG GGAAGCGTGC TTTGCCTCAG GCATGGTTGA CCATATTGCC
AAGCCTATCG AACCGGACAA GCTGCTAGGC GTTATTCTCA AGCATGTTCG CAACAACAAA
CCTTGA
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| Protein sequence | MFGLFNWRSL QTRIAVGTLI VVLGILWTTV IALGQLLHRD MEESISAQQF STVSLIANEI
DRSILERQSI AESVASSLTA TILASPAATQ RLVEERKIPQ RIFNWGIIVT DSQGTAIAST
PLELDRKGTN YANYDFISKA LSTGIPQIAD PVFSPNSGLP VFTIVVPIQN PAGKTIGLVI
GVTNLALPNF LDEIGSAKYG NTGDFLITAP AKRLFVASSD KRRVMKAGPP PGLNPVYDRY
IGGYEGSGVA MSSRGVVELS SNKRIASTGW LMQAVLPTDE AFAPIHAMER HLIVISLILT
LIATFASWWW LRLQFRPLSE ISSLLRQMRD GEIPRQALPV IRQDEIGLLT EALNGLQEVI
VTEEAMAAEH AANNRLRHIV SYIPGIVFQY RLFPDGHSAF PFASDGIREI YGLAPDQVEN
DVRPLSDMMH PDDAEHFLAT MHESAKTLSP WHVDYRICLP DGKTKWLMIN AQPESSKDGS
TLWHGFIADI SEMKAMSAEL EHYRDHLEQL VKVRTADLEA SRAEAERLAL AKSEFLAKMS
HEIRTPLHGV LGMAHIGGRN TSEGSKAHEA FAKITHSGNL LLGIINDILD FSKMEAGMLK
IESTDIDLPA ILAESMELMQ ERANAKKLSL QLRVAENLPA HCQSDSLRLR QILLNLLSNA
VKFTVSGSVT LDASFDGHQL IFKVSDTGIG ITHEQSSKIF NPFEQGDNST TRRFGGTGLG
LAITSHLVKL MEGTIHLEST PDNGSRFEIR LPYHPIVAES AAIPLAAPAL AAKPLSGLRI
LVAEDIDINQ EIMEAILHDF GAEVSMVSNG LEAVQKIQQH GDSGFDVVLM DIQMPVMNGH
DATRQILRIA PGLPIIGQTA HALTEEREAC FASGMVDHIA KPIEPDKLLG VILKHVRNNK
P
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