Gene Daro_2342 details

Gene Information

• Locus tag: Daro_2342
• Symbol: smpB
• ID: 3566061
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dechloromonas aromatica RCB
• Kingdom: Bacteria
• Replicon accession: NC_007298
• Strand: +
• Start bp: 2523196
• End bp: 2523645
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637680808
• Product: SsrA-binding protein
• Protein accession: YP_285548
• Protein GI: 71907961
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 62
• Plasmid unclonability p-value: 0.994349
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.13276
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCATTA CTGTCAACAA AAAAGCCTTT CACGACTACT TTGTCGAAGA AAAGTACGAG 
GCCGGCATTT CCCTCGAAGG TTGGGAGGTC AAAGCCATTC GCGCCGGACG GATGAACATC 
AAGGAATCCT ACGTCATCAT CAAGGGCGGC GAGCTTTTCC TGATTGGCAT GCATATATCA 
CCGCTGGCCA CCGCCTCGAC CCATGTCAGC CACGATCCGA CACGCACGCG CAAGCTGTTG 
TTGCACGCCA AGGAAATCAG CAAACTGATC GGCAAAGTCG AGCGCGCCGG ATACGCCTTG 
GTACCGCTTG ATTTGCATTT CGTACGGGGT CGAATCAAAC TTGAAATTGG CTTGGCCAAG 
GGCAAAAAGC AGCACGACAA ACGTGCCGAC GAACTGGACA AGGATTCAAA GCGCGAAGCA 
CAGCGCGCCA TGAAAGAACG CCAGAGATAG 

 

Protein sequence

MSITVNKKAF HDYFVEEKYE AGISLEGWEV KAIRAGRMNI KESYVIIKGG ELFLIGMHIS 
PLATASTHVS HDPTRTRKLL LHAKEISKLI GKVERAGYAL VPLDLHFVRG RIKLEIGLAK 
GKKQHDKRAD ELDKDSKREA QRAMKERQR